RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 DNAJA1P31689 397 aaKnown RBP8□□□□□ -1.13
RIF1-208ENST00000457745 SOX3P41225 446 aa8□□□□□ -1.13
RIF1-208ENST00000457745 ALDH3A2P51648 485 aa8□□□□□ -1.13
RIF1-208ENST00000457745 HMGA2P52926 109 aa8□□□□□ -1.13
RIF1-208ENST00000457745 GAS1P54826 345 aa8□□□□□ -1.13
RIF1-208ENST00000457745 UGT2B15P54855 530 aa8□□□□□ -1.13
RIF1-208ENST00000457745 ZNF117Q03924 483 aa8□□□□□ -1.13
RIF1-208ENST00000457745 DBPQ10586 325 aaPredicted RBP8□□□□□ -1.13
RIF1-208ENST00000457745 KCNAB2Q13303 367 aa8□□□□□ -1.13
RIF1-208ENST00000457745 SKP2Q13309 424 aa8□□□□□ -1.13
RIF1-208ENST00000457745 BIKQ13323 160 aa8□□□□□ -1.13
RIF1-208ENST00000457745 EIF3IQ13347 325 aaKnown RBP8□□□□□ -1.13
RIF1-208ENST00000457745 ZNHIT3Q15649 155 aaPredicted RBP8□□□□□ -1.13
RIF1-208ENST00000457745 KDM4DQ6B0I6 523 aa8□□□□□ -1.13
RIF1-208ENST00000457745 PGBD2Q6P3X8 592 aa8□□□□□ -1.13
RIF1-208ENST00000457745 HSDL2Q6YN16 418 aa8□□□□□ -1.13
RIF1-208ENST00000457745 PRICKLE2Q7Z3G6 844 aa8□□□□□ -1.13
RIF1-208ENST00000457745 TMPRSS12Q86WS5 348 aa8□□□□□ -1.13
RIF1-208ENST00000457745 KIF18BQ86Y91 864 aa8□□□□□ -1.13
RIF1-208ENST00000457745 OR10G2Q8NGC3 310 aa8□□□□□ -1.13
RIF1-208ENST00000457745 TMEM255BQ8WV15 326 aa8□□□□□ -1.13
RIF1-208ENST00000457745 LZICQ8WZA0 190 aa8□□□□□ -1.13
RIF1-208ENST00000457745 PSMF1Q92530 271 aa8□□□□□ -1.13
RIF1-208ENST00000457745 TFAP2CQ92754 450 aa8□□□□□ -1.13
RIF1-208ENST00000457745 RELTQ969Z4 430 aa8□□□□□ -1.13
RIF1-208ENST00000457745 ALPK1Q96QP1 1244 aa8□□□□□ -1.13
RIF1-208ENST00000457745 FEVQ99581 238 aa8□□□□□ -1.13
RIF1-208ENST00000457745 ZPBPQ9BS86 351 aa8□□□□□ -1.13
RIF1-208ENST00000457745 BDH2Q9BUT1 245 aa8□□□□□ -1.13
RIF1-208ENST00000457745 ADI1Q9BV57 179 aa8□□□□□ -1.13
RIF1-208ENST00000457745 IRF2BPLQ9H1B7 796 aa8□□□□□ -1.13
RIF1-208ENST00000457745 DSN1Q9H410 356 aa8□□□□□ -1.13
RIF1-208ENST00000457745 PROK2Q9HC23 129 aa8□□□□□ -1.13
RIF1-208ENST00000457745 ZBTB20Q9HC78 741 aaPredicted RBP8□□□□□ -1.13
RIF1-208ENST00000457745 GALNT9Q9HCQ5 603 aa8□□□□□ -1.13
RIF1-208ENST00000457745 POLE3Q9NRF9 147 aa8□□□□□ -1.13
RIF1-208ENST00000457745 REV1Q9UBZ9 1251 aa8□□□□□ -1.13
RIF1-208ENST00000457745 NXT1Q9UKK6 140 aaKnown RBP8□□□□□ -1.13
RIF1-208ENST00000457745 CNOT11Q9UKZ1 510 aaKnown RBP8□□□□□ -1.13
RIF1-208ENST00000457745 IGKV1D-42A0A075B6H8 117 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 A0A1B0GWA3 101 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 SH3PXD2BA1X283 911 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 OR6C76A6NM76 312 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 GNB5O14775 395 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 PPM1BO75688 479 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 CYP7B1O75881 506 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 GADD45GO95257 159 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 H1F0P07305 194 aaKnown RBP7.99□□□□□ -1.13
RIF1-208ENST00000457745 THRBP10828 461 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 RYKP34925 604 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 MYBPC1Q00872 1141 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 EPS8Q12929 822 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 CHAF1BQ13112 559 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 GNA13Q14344 377 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 OR1Q1Q15612 314 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 DECR1Q16698 335 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 MICAQ29983 383 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 CTU2Q2VPK5 515 aaKnown RBP7.99□□□□□ -1.13
RIF1-208ENST00000457745 SLC36A3Q495N2 470 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 FGD3Q5JSP0 725 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 UGT2A3Q6UWM9 527 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 PLEKHM3Q6ZWE6 761 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 USP51Q70EK9 711 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 SLC29A4Q7RTT9 530 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 ZER1Q7Z7L7 766 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 ZNF227Q86WZ6 799 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 CACTIN-AS1Q8N1I8 211 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 SVOPLQ8N434 492 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 ESX1Q8N693 406 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 PACRGLQ8N7B6 248 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 AQP11Q8NBQ7 271 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 OR10G3Q8NGC4 313 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 OR4K5Q8NGD3 323 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 PFN4Q8NHR9 129 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 NUBPLQ8TB37 319 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 ADAMTS16Q8TE57 1224 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 GIPC3Q8TF64 312 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 SGCDQ92629 289 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 MED12Q93074 2177 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 UBE2FQ969M7 185 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 GTPBP3Q969Y2 492 aaKnown RBP7.99□□□□□ -1.13
RIF1-208ENST00000457745 NTNG2Q96CW9 530 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 SLC41A3Q96GZ6 507 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 SH3YL1Q96HL8 342 aaPredicted RBP7.99□□□□□ -1.13
RIF1-208ENST00000457745 ART5Q96L15 291 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 RASL10BQ96S79 203 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 SPATA5L1Q9BVQ7 753 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 YY1AP1Q9H869 796 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 MMP25Q9NPA2 562 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 C20orf141Q9NUB4 165 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 P4HTMQ9NXG6 502 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 SMPD3Q9NY59 655 aaPredicted RBP7.99□□□□□ -1.13
RIF1-208ENST00000457745 COPS7AQ9UBW8 275 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 SLC7A7Q9UM01 511 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 WASF3Q9UPY6 502 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 CARD8Q9Y2G2 431 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 IFT52Q9Y366 437 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 NPFFR2Q9Y5X5 522 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 AKAP13Q12802 2813 aa7.99□□□□□ -1.13
RIF1-208ENST00000457745 NSG1A0A0A6YYJ2 146 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms