RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 ZNF350Q9GZX5 532 aa20.94■□□□□ 0.94
CBX3-204ENST00000456948 SERHL2Q9H4I8 314 aa20.94■□□□□ 0.94
CBX3-204ENST00000456948 MED17Q9NVC6 651 aa20.94■□□□□ 0.94
CBX3-204ENST00000456948 THUMPD1Q9NXG2 353 aaKnown RBP20.94■□□□□ 0.94
CBX3-204ENST00000456948 PAQR5Q9NXK6 330 aaPredicted RBP20.94■□□□□ 0.94
CBX3-204ENST00000456948 MKLN1Q9UL63 735 aa20.94■□□□□ 0.94
CBX3-204ENST00000456948 PCNX3Q9H6A9 2034 aa20.94■□□□□ 0.94
CBX3-204ENST00000456948 NPIPA5A0A0B4J1W7 369 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 TMEM247A6NEH6 219 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 SERINC4A6NH21 518 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 B4DXG7 233 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 NPIPA7E9PJI5 369 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 NPIPB9F8W1W9 429 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 SEC14L5O43304 696 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 TNFRSF21O75509 655 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 RCBTB2O95199 551 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 IL18BPO95998 194 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 GSNP06396 782 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 SNRPB2P08579 225 aaKnown RBP20.93■□□□□ 0.94
CBX3-204ENST00000456948 ZCCHC18P0CG32 403 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 NPIPA8P0DM63 369 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 TMIGD3P0DMS9 266 aaPredicted RBP20.93■□□□□ 0.94
CBX3-204ENST00000456948 UBL4AP11441 157 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 ZNF141Q15928 474 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 SGCBQ16585 318 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 EIF3MQ7L2H7 374 aaKnown RBP20.93■□□□□ 0.94
CBX3-204ENST00000456948 GDF7Q7Z4P5 450 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 TMCO5AQ8N6Q1 288 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 OR5M1Q8NGP8 315 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 STON2Q8WXE9 905 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 SMPDL3BQ92485 455 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 ENKD1Q9H0I2 346 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 RAD21L1Q9H4I0 556 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 FOXD3Q9UJU5 478 aaPredicted RBP20.93■□□□□ 0.94
CBX3-204ENST00000456948 CARD8Q9Y2G2 431 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 INTS1Q8N201 2190 aaKnown RBP20.93■□□□□ 0.94
CBX3-204ENST00000456948 NOTCH2Q04721 2471 aa20.93■□□□□ 0.94
CBX3-204ENST00000456948 SLC22A20A6NK97 555 aa20.92■□□□□ 0.94
CBX3-204ENST00000456948 ADH6P28332 368 aa20.92■□□□□ 0.94
CBX3-204ENST00000456948 ZNF117Q03924 483 aa20.92■□□□□ 0.94
CBX3-204ENST00000456948 CBFBQ13951 182 aa20.92■□□□□ 0.94
CBX3-204ENST00000456948 GNA13Q14344 377 aa20.92■□□□□ 0.94
CBX3-204ENST00000456948 CD226Q15762 336 aa20.92■□□□□ 0.94
CBX3-204ENST00000456948 TMEM44Q2T9K0 475 aa20.92■□□□□ 0.94
CBX3-204ENST00000456948 TIGD2Q4W5G0 525 aa20.92■□□□□ 0.94
CBX3-204ENST00000456948 PDZK1Q5T2W1 519 aa20.92■□□□□ 0.94
CBX3-204ENST00000456948 MCEMP1Q8IX19 187 aa20.92■□□□□ 0.94
CBX3-204ENST00000456948 ZNF619Q8N2I2 560 aa20.92■□□□□ 0.94
CBX3-204ENST00000456948 PMM1Q92871 262 aa20.92■□□□□ 0.94
CBX3-204ENST00000456948 TRNT1Q96Q11 434 aaKnown RBP20.92■□□□□ 0.94
CBX3-204ENST00000456948 EBF4Q9BQW3 602 aa20.92■□□□□ 0.94
CBX3-204ENST00000456948 SLC35A3Q9Y2D2 325 aa20.92■□□□□ 0.94
CBX3-204ENST00000456948 GPC6Q9Y625 555 aaPredicted RBP20.92■□□□□ 0.94
CBX3-204ENST00000456948 TEX15Q9BXT5 2789 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 GJE1A6NN92 205 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 C19orf84I3L1E1 186 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 FCMRO60667 390 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 CSTAP01040 98 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 NR2F1P10589 423 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 CDKN2CP42773 168 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 ASCL1P50553 236 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 ATP4BP51164 291 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 RAC1P63000 192 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 SQLEQ14534 574 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 PLPPR5Q32ZL2 321 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 ADGRE4PQ86SQ3 457 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 OR9I1Q8NGQ6 314 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 OR5W2Q8NH69 310 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 RFWD2Q8NHY2 731 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 SFXN3Q9BWM7 321 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 LAT2Q9GZY6 243 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 CACYBPQ9HB71 228 aaKnown RBP20.91■□□□□ 0.94
CBX3-204ENST00000456948 MED4Q9NPJ6 270 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.91■□□□□ 0.94
CBX3-204ENST00000456948 CALML5Q9NZT1 146 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 CLCF1Q9UBD9 225 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 ZNF175Q9Y473 711 aa20.91■□□□□ 0.94
CBX3-204ENST00000456948 HMGN4O00479 90 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 UGT2B17O75795 530 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 CYP7B1O75881 506 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 CRHP06850 196 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 FCGR2AP12318 317 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 SSTR2P30874 369 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 CRATP43155 626 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 CCR4P51679 360 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 ZNF136P52737 540 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.9■□□□□ 0.94
CBX3-204ENST00000456948 AP1ARQ63HQ0 302 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 TYW3Q6IPR3 259 aaKnown RBP20.9■□□□□ 0.94
CBX3-204ENST00000456948 DNAJC14Q6Y2X3 702 aaPredicted RBP20.9■□□□□ 0.94
CBX3-204ENST00000456948 LIX1LQ8IVB5 337 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 C9orf106Q8NAJ2 232 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 ZFP90Q8TF47 636 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 TMEM234Q8WY98 164 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 VPS33AQ96AX1 596 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 PRRG4Q9BZD6 226 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 SAP130Q9H0E3 1048 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 MTHFD2LQ9H903 347 aaPredicted RBP20.9■□□□□ 0.94
CBX3-204ENST00000456948 TPT1P8Q9HAU6 139 aa20.9■□□□□ 0.94
CBX3-204ENST00000456948 MRGBPQ9NV56 204 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms