RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 POLE3Q9NRF9 147 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 MED17Q9NVC6 651 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 MED12Q93074 2177 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 SERINC4A6NH21 518 aa16.32■□□□□ 0.2
PDLIM2-215ENST00000456545 NR2F1P10589 423 aa16.32■□□□□ 0.2
PDLIM2-215ENST00000456545 ZNF17P17021 662 aa16.32■□□□□ 0.2
PDLIM2-215ENST00000456545 NCF2P19878 526 aaPredicted RBP16.32■□□□□ 0.2
PDLIM2-215ENST00000456545 EIF1P41567 113 aaKnown RBP16.32■□□□□ 0.2
PDLIM2-215ENST00000456545 CRATP43155 626 aa16.32■□□□□ 0.2
PDLIM2-215ENST00000456545 AGFG1P52594 562 aaKnown RBP16.32■□□□□ 0.2
PDLIM2-215ENST00000456545 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.32■□□□□ 0.23e-8■■■■■ 44.2
PDLIM2-215ENST00000456545 HEPHL1Q6MZM0 1159 aa16.32■□□□□ 0.2
PDLIM2-215ENST00000456545 OLIG3Q7RTU3 272 aa16.32■□□□□ 0.2
PDLIM2-215ENST00000456545 C9orf106Q8NAJ2 232 aa16.32■□□□□ 0.2
PDLIM2-215ENST00000456545 NAXEQ8NCW5 288 aa16.32■□□□□ 0.2
PDLIM2-215ENST00000456545 TOR1AIP2Q8NFQ8 470 aa16.32■□□□□ 0.2
PDLIM2-215ENST00000456545 INTS12Q96CB8 462 aaKnown RBP16.32■□□□□ 0.2
PDLIM2-215ENST00000456545 SPOCK3Q9BQ16 436 aa16.32■□□□□ 0.2
PDLIM2-215ENST00000456545 PRRG4Q9BZD6 226 aa16.32■□□□□ 0.2
PDLIM2-215ENST00000456545 CCDC167Q9P0B6 97 aa16.32■□□□□ 0.2
PDLIM2-215ENST00000456545 DCTN4Q9UJW0 460 aa16.32■□□□□ 0.2
PDLIM2-215ENST00000456545 LIPT1Q9Y234 373 aa16.32■□□□□ 0.2
PDLIM2-215ENST00000456545 CACNA1CQ13936 2221 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 UQCRHLA0A096LP55 91 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 TMEM247A6NEH6 219 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 SLC22A20A6NK97 555 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 NPIPB9F8W1W9 429 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 HMGN4O00479 90 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 EIF1AYO14602 144 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 EIF4E2O60573 245 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 TNFRSF21O75509 655 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 RCBTB2O95199 551 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 CSTAP01040 98 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 UQCRC1P31930 480 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 ZNF136P52737 540 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 SUCLG1P53597 346 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 SUMO3P55854 103 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 CBFBQ13951 182 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 ZNF141Q15928 474 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 PLPPR5Q32ZL2 321 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 NDUFAF6Q330K2 333 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 PDSS1Q5T2R2 415 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 PLXDC2Q6UX71 529 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 EIF3MQ7L2H7 374 aaKnown RBP16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 ZNF619Q8N2I2 560 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 GTPBP8Q8N3Z3 284 aaPredicted RBP16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 RNF145Q96MT1 663 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 ZFP3Q96NJ6 502 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 UCN2Q96RP3 112 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 PINK1Q9BXM7 581 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 ZNF350Q9GZX5 532 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 RABEP2Q9H5N1 569 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 NPHS2Q9NP85 383 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 ZNF446Q9NWS9 450 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 TRIM33Q9UPN9 1127 aa16.31■□□□□ 0.2
PDLIM2-215ENST00000456545 CACNA1DQ01668 2161 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 EEF1E1-BLOC1S5C9J1V9 151 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 NR5A2O00482 541 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 EEF1E1O43324 174 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 EDF1O60869 148 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 UGT2B17O75795 530 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 H6PDO95479 791 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 OPN1LWP04000 364 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 ZCCHC18P0CG32 403 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 EIF1AXP47813 144 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 ASCL1P50553 236 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 CLDN15P56746 228 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 CLDN20P56880 219 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 RAC1P63000 192 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 EEF1A1P68104 462 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 IRX1P78414 480 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 SYPL1Q16563 259 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 AGKQ53H12 422 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 EEF1A1P5Q5VTE0 462 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 OR2A2Q6IF42 318 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 TYW3Q6IPR3 259 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 CBLN3Q6UW01 205 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 GDF7Q7Z4P5 450 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 OR5W2Q8NH69 310 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 ZFP90Q8TF47 636 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 TRNT1Q96Q11 434 aaKnown RBP16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 ENKD1Q9H0I2 346 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 TPT1P8Q9HAU6 139 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 SLC24A3Q9HC58 644 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 ICAM5Q9UMF0 924 aa16.3■□□□□ 0.2
PDLIM2-215ENST00000456545 A0A0G2JND7 137 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 C7orf72A4D263 438 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 H0YC42 278 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 OIP5O43482 229 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 SYNGR4O95473 234 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 IL18BPO95998 194 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 C1QCP02747 245 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 GUSBP08236 651 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 UBTFL6P0CB48 400 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 MAGEA8P43361 318 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 TPD52P55327 224 aaPredicted RBP16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 CHRNEQ04844 493 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 TFF3Q07654 80 aa16.29■□□□□ 0.2
PDLIM2-215ENST00000456545 GNA13Q14344 377 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms