RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 ZNF611Q8N823 705 aa9.04□□□□□ -0.96
LINC01004-202ENST00000450686 NUP43Q8NFH3 380 aa9.04□□□□□ -0.96
LINC01004-202ENST00000450686 JADE3Q92613 823 aa9.04□□□□□ -0.96
LINC01004-202ENST00000450686 HTRA1Q92743 480 aa9.04□□□□□ -0.96
LINC01004-202ENST00000450686 OSTF1Q92882 214 aa9.04□□□□□ -0.96
LINC01004-202ENST00000450686 CAVIN3Q969G5 261 aa9.04□□□□□ -0.96
LINC01004-202ENST00000450686 DNAJA3Q96EY1 480 aa9.04□□□□□ -0.96
LINC01004-202ENST00000450686 CHMP6Q96FZ7 201 aa9.04□□□□□ -0.96
LINC01004-202ENST00000450686 TMEM204Q9BSN7 226 aa9.04□□□□□ -0.96
LINC01004-202ENST00000450686 CXorf56Q9H5V9 222 aa9.04□□□□□ -0.96
LINC01004-202ENST00000450686 SIRT5Q9NXA8 310 aa9.04□□□□□ -0.96
LINC01004-202ENST00000450686 TAS2R7Q9NYW3 318 aa9.04□□□□□ -0.96
LINC01004-202ENST00000450686 SH3BP4Q9P0V3 963 aa9.04□□□□□ -0.96
LINC01004-202ENST00000450686 GDF2Q9UK05 429 aaPredicted RBP9.04□□□□□ -0.96
LINC01004-202ENST00000450686 MCTS1Q9ULC4 181 aaKnown RBP9.04□□□□□ -0.96
LINC01004-202ENST00000450686 GRID1Q9ULK0 1009 aa9.04□□□□□ -0.96
LINC01004-202ENST00000450686 SMIM23A6NLE4 172 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 ALG1L2C9J202 215 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 LINC01387J3KSC0 135 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 ADAMDEC1O15204 470 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 CRLF1O75462 422 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 RSL1D1O76021 490 aaKnown RBP9.03□□□□□ -0.96
LINC01004-202ENST00000450686 SOX30O94993 753 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 IGHV4-39P01824 125 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 PROCP04070 461 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 GSTA1P08263 222 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 ZNF17P17021 662 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 ZNF41P51814 821 aaPredicted RBP9.03□□□□□ -0.96
LINC01004-202ENST00000450686 RPS4XP62701 263 aaKnown RBP9.03□□□□□ -0.96
LINC01004-202ENST00000450686 RPL38P63173 70 aaKnown RBP9.03□□□□□ -0.96
LINC01004-202ENST00000450686 ZNF117Q03924 483 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 FGFBP1Q14512 234 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 KIAA0040Q15053 153 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 TAB1Q15750 504 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 ZNF239Q16600 458 aaKnown RBP9.03□□□□□ -0.96
LINC01004-202ENST00000450686 WHAMMP3Q1A5X7 153 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 GLYR1Q49A26 553 aaPredicted RBP9.03□□□□□ -0.96
LINC01004-202ENST00000450686 CPTPQ5TA50 214 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 CBLN3Q6UW01 205 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 SEZ6L2Q6UXD5 910 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 TFAP2EQ6VUC0 442 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 SLC22A9Q8IVM8 553 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 LILRA2Q8N149 483 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 COX18Q8N8Q8 333 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 ANP32BQ92688 251 aaKnown RBP9.03□□□□□ -0.96
LINC01004-202ENST00000450686 CDS1Q92903 461 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 KLHL15Q96M94 604 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 TUBB1Q9H4B7 451 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 COQ10BQ9H8M1 238 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 PRSS50Q9UI38 385 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 MRTO4Q9UKD2 239 aaKnown RBP9.03□□□□□ -0.96
LINC01004-202ENST00000450686 RNF115Q9Y4L5 304 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 KCNE3Q9Y6H6 103 aa9.03□□□□□ -0.96
LINC01004-202ENST00000450686 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.02□□□□□ -0.97
LINC01004-202ENST00000450686 A0A1W2PNR3 127 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 SERTM1A2A2V5 107 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 CCDC151A5D8V7 595 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 GPRIN2O60269 458 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 RAMP1O60894 148 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 ADAM11O75078 769 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 LYZL6O75951 148 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 NUDT14O95848 222 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 ADAP00813 363 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 SHBGP04278 402 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 TUBBP07437 444 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 ABHD2P08910 425 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 LINGO3P0C6S8 592 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 LINC00032P0C843 101 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 DANCRP0C864 163 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 PAX1P15863 534 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 PPP3CBP16298 524 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 ENPP1P22413 925 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 PSMD4P55036 377 aaKnown RBP9.02□□□□□ -0.97
LINC01004-202ENST00000450686 MANFP55145 182 aaKnown RBP9.02□□□□□ -0.97
LINC01004-202ENST00000450686 CARD18P57730 90 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 RAC1P63000 192 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 BSPH1Q075Z2 132 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 DMTNQ08495 405 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 LASP1Q14847 261 aaKnown RBP9.02□□□□□ -0.97
LINC01004-202ENST00000450686 STK11Q15831 433 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 TMEM176BQ3YBM2 270 aaPredicted RBP9.02□□□□□ -0.97
LINC01004-202ENST00000450686 GALNTL6Q49A17 601 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 RFTN2Q52LD8 501 aaPredicted RBP9.02□□□□□ -0.97
LINC01004-202ENST00000450686 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.02□□□□□ -0.97
LINC01004-202ENST00000450686 LCE2AQ5TA79 106 aaPredicted RBP9.02□□□□□ -0.97
LINC01004-202ENST00000450686 CDC73Q6P1J9 531 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 Q6ZSR9 355 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 BEND4Q6ZU67 534 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 ESPNLQ6ZVH7 1005 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 GABRG1Q8N1C3 465 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 BANPQ8N9N5 519 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 B4GALNT2Q8NHY0 566 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 RFWD2Q8NHY2 731 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 FBXO27Q8NI29 283 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 FAM110BQ8TC76 370 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 PHOSPHO1Q8TCT1 267 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 RNF128Q8TEB7 428 aa9.02□□□□□ -0.97
LINC01004-202ENST00000450686 HOXB13Q92826 284 aaPredicted RBP9.02□□□□□ -0.97
LINC01004-202ENST00000450686 GTPBP3Q969Y2 492 aaKnown RBP9.02□□□□□ -0.97
LINC01004-202ENST00000450686 PPCDCQ96CD2 204 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms