RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ZNF486Q96H40 463 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 SLC38A2Q96QD8 506 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 MTMR9Q96QG7 549 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 PANX1Q96RD7 426 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 SLC6A7Q99884 636 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 OPRPNQ99935 248 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 C19orf43Q9BQ61 176 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 TUBGCP2Q9BSJ2 902 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 TMEM121Q9BTD3 319 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 HOXD1Q9GZZ0 328 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 IQCGQ9H095 443 aaKnown RBP3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 TMEM185BQ9H7F4 350 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 MTHFD2LQ9H903 347 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 SLC17A5Q9NRA2 495 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 GALPQ9UBC7 116 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 LNPEPQ9UIQ6 1025 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 PPIAL4AQ9Y536 164 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 PNPLA6Q8IY17 1366 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 PRDM2Q13029 1718 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 KIF21BO75037 1637 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 MAP3K4Q9Y6R4 1608 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 ARAP3Q8WWN8 1544 aa3.7□□□□□ -1.82
HMGB1P48-201ENST00000446155 UHRF1BP1LA0JNW5 1464 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 TNIKQ9UKE5 1360 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 NINLQ9Y2I6 1382 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 IQCMA0A1B0GVH7 501 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 LRP5LA4QPB2 252 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 M0QX08 132 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 TM9SF1O15321 606 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 PPIHO43447 177 aaKnown RBP3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 TOM1O60784 492 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 PDE5AO76074 875 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 GAS8-AS1O95177 125 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 CLDN1O95832 211 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 F10P00742 488 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 S100A9P06702 114 aaKnown RBP3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 RNF224P0DH78 156 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 ETS2P15036 469 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 ACADSP16219 412 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 UCP1P25874 307 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 CASP14P31944 242 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 FCGR2CP31995 323 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 STK19P49842 368 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 EMDP50402 254 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 EFNB2P52799 333 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 CRYBA2P53672 197 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 CARD18P57730 90 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 KRTAP10-6P60371 365 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 RGS1Q08116 209 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 DMTNQ08495 405 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 BST2Q10589 180 aaKnown RBP3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 EMC2Q15006 297 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 TTC19Q6DKK2 380 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 TMEM107Q6UX40 140 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 MOB2Q70IA6 237 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 CYS1Q717R9 158 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 CENPQQ7L2Z9 268 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 H2BFWTQ7Z2G1 175 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 HSD11B1LQ7Z5J1 315 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 KATNAL2Q8IYT4 538 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 CEP112Q8N8E3 955 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 FAM83FQ8NEG4 500 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 TRPV1Q8NER1 839 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 OR10A7Q8NGE5 316 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 CNIH3Q8TBE1 160 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 TSEN15Q8WW01 171 aaKnown RBP3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 SLCO2A1Q92959 643 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 ISG20Q96AZ6 181 aaKnown RBP3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 BIRC7Q96CA5 298 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 C11orf24Q96F05 449 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 POM121L2Q96KW2 1035 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 ALKBH3Q96Q83 286 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 BPIFA3Q9BQP9 254 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 CLEC7AQ9BXN2 247 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 DUSP16Q9BY84 665 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 NXF5Q9H1B4 397 aaKnown RBP3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 GLT8D2Q9H1C3 349 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 EHD1Q9H4M9 534 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 AUNIPQ9H7T9 357 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 ZNF160Q9HCG1 818 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 ZDHHC18Q9NUE0 388 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 KLHL28Q9NXS3 571 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 IL36GQ9NZH8 169 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 EXOGQ9Y2C4 368 aaKnown RBP3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 MRPS18CQ9Y3D5 142 aaKnown RBP3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 ALG6Q9Y672 507 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 MADDQ8WXG6 1647 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 UACAQ9BZF9 1416 aa3.69□□□□□ -1.82
HMGB1P48-201ENST00000446155 ADAMTS12P58397 1594 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 SUPT3HB4E1H0 165 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 C9JVG2 144 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 NPIPB9F8W1W9 429 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 G3V4G9 280 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 K7ERI5 159 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 HAS3O00219 553 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 MSH4O15457 936 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 TAPBPO15533 448 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 CEACAM4O75871 244 aa3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 CA1P00915 261 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P48-201ENST00000446155 CST1P01037 141 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms