RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, human

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP3-208	ENST00000444533	ADH7	P40394	386 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	EIF1	P41567	113 aa	Known RBP	12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	SLC6A8	P48029	635 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	PER3	P56645	1201 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	HSF1	Q00613	529 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	FGFBP1	Q14512	234 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	EIF2S3L	Q2VIR3	472 aa	Known RBP	12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	GLYR1	Q49A26	553 aa	Predicted RBP	12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	EIPR1	Q53HC9	387 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	WIPI1	Q5MNZ9	446 aa	Predicted RBP	12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	AP1AR	Q63HQ0	302 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	MTFR2	Q6P444	385 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	ERICH5	Q6P6B1	374 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	CHMP1B	Q7LBR1	199 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	ZNF440	Q8IYI8	595 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	OR52P1P	Q8NH57	321 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	OR10A6	Q8NH74	314 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	SLC26A7	Q8TE54	656 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	TMEM234	Q8WY98	164 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	ABTB1	Q969K4	478 aa	Predicted RBP	12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	MAL2	Q969L2	176 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	ZBTB8A	Q96BR9	441 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	NTNG2	Q96CW9	530 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	C1GALT1C1	Q96EU7	318 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	OR2B2	Q9GZK3	357 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	LAT2	Q9GZY6	243 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	SLC6A15	Q9H2J7	730 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	KAT8	Q9H7Z6	458 aa	Known RBP	12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	BCL2L10	Q9HD36	194 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	PLSCR2	Q9NRY7	297 aa		12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	RPH3A	Q9Y2J0	694 aa	Predicted RBP	12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	SMG1	Q96Q15	3661 aa	Known RBP	12.82	□□□□□ -0.36
SSBP3-208	ENST00000444533	RP1L1	Q8IWN7	2480 aa	Predicted RBP	12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	PGM3	O95394	542 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	IFNA14	P01570	189 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	C1QC	P02747	245 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	THBS1	P07996	1170 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	NUDT7	P0C024	238 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	NID1	P14543	1247 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	GABRA1	P14867	456 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	TCEA1	P23193	301 aa	Known RBP	12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	CHM	P24386	653 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	ZNF117	Q03924	483 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	CD226	Q15762	336 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	ZNF311	Q5JNZ3	666 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	HACD2	Q6Y1H2	254 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	TREML1	Q86YW5	311 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	TNIP2	Q8NFZ5	429 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	OR5W2	Q8NH69	310 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	ZNF563	Q8TA94	476 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	FAM57A	Q8TBR7	257 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	SLC39A3	Q9BRY0	314 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	QRSL1	Q9H0R6	528 aa	Known RBP	12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	TP63	Q9H3D4	680 aa	Predicted RBP	12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	KLHL28	Q9NXS3	571 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	ALKBH4	Q9NXW9	302 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	SH3BGRL2	Q9UJC5	107 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	VDAC3	Q9Y277	283 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	SVIL	O95425	2214 aa		12.81	□□□□□ -0.36
SSBP3-208	ENST00000444533	PRAMEF27	A3QJZ7	478 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	GSTA4	O15217	222 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	DNAJA2	O60884	412 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	GMNN	O75496	209 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	STS	P08842	583 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	HOXD4	P09016	255 aa	Predicted RBP	12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	ZNF17	P17021	662 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	POU3F2	P20265	443 aa	Predicted RBP	12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	PTGER4	P35408	488 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	UQCRFS1	P47985	274 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	RNF144A	P50876	292 aa	Predicted RBP	12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	EEFSEC	P57772	596 aa	Known RBP	12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	COPZ1	P61923	177 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	KRT72	Q14CN4	511 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	RABL3	Q5HYI8	236 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	FAM91A1	Q658Y4	838 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	C16orf89	Q6UX73	402 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	OLIG3	Q7RTU3	272 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	PATL1	Q86TB9	770 aa	Known RBP	12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	CD163	Q86VB7	1156 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	ARMC8	Q8IUR7	673 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	RASSF5	Q8WWW0	418 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	REXO5	Q96IC2	774 aa	Known RBP	12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	RTN4R	Q9BZR6	473 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	IKZF5	Q9H5V7	419 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	PIF1	Q9H611	641 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	RUBCNL	Q9H714	662 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	EXOSC3	Q9NQT5	275 aa	Known RBP	12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	PRDM4	Q9UKN5	801 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	CAMK2A	Q9UQM7	478 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	SLC5A6	Q9Y289	635 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	ZNF443	Q9Y2A4	671 aa	Predicted RBP	12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	SLC6A5	Q9Y345	797 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	LIPG	Q9Y5X9	500 aa		12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	GPC6	Q9Y625	555 aa	Predicted RBP	12.8	□□□□□ -0.36
SSBP3-208	ENST00000444533	PRRC2C	Q9Y520	2896 aa	Known RBP	12.79	□□□□□ -0.36
SSBP3-208	ENST00000444533	CFAP46	Q8IYW2	2715 aa		12.79	□□□□□ -0.36
SSBP3-208	ENST00000444533	PYCARD-AS1	I3L0S3	204 aa		12.79	□□□□□ -0.36
SSBP3-208	ENST00000444533	WDR1	O75083	606 aa		12.79	□□□□□ -0.36
SSBP3-208	ENST00000444533	ZIC2	O95409	532 aa	Predicted RBP	12.79	□□□□□ -0.36

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