RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 PRKCDQ05655 676 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 COL9A2Q14055 689 aaPredicted RBP12.16□□□□□ -0.46
CPSF4-206ENST00000441580 SNAPC1Q16533 368 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 TIMM50Q3ZCQ8 353 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 SYT14P1Q58G82 188 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 PERM1Q5SV97 790 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 ARHGAP22Q7Z5H3 698 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 FAM71CQ8NEG0 241 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 OR8D4Q8NGM9 314 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 PTPMT1Q8WUK0 201 aaPredicted RBP12.16□□□□□ -0.46
CPSF4-206ENST00000441580 CNOT9Q92600 299 aaKnown RBP12.16□□□□□ -0.46
CPSF4-206ENST00000441580 RFKQ969G6 155 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 TMEM80Q96HE8 168 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 SENP5Q96HI0 755 aaPredicted RBP12.16□□□□□ -0.46
CPSF4-206ENST00000441580 PRR14Q9BWN1 585 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 MND1Q9BWT6 205 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 PLA2G12AQ9BZM1 189 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 TGIF2Q9GZN2 237 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 LRRN3Q9H3W5 708 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 DSN1Q9H410 356 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 GAREM1Q9H706 876 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 EXOSC3Q9NQT5 275 aaKnown RBP12.16□□□□□ -0.46
CPSF4-206ENST00000441580 RARRES3Q9UL19 164 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.16□□□□□ -0.46
CPSF4-206ENST00000441580 BAIAP2Q9UQB8 552 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 SCN2AQ99250 2005 aa12.16□□□□□ -0.46
CPSF4-206ENST00000441580 IGLV3-12A0A075B6K2 115 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 A0A1B0GWA3 101 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 HTR3EA5X5Y0 456 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 MYL12BO14950 172 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 RCBTB2O95199 551 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 RAB36O95755 333 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 DDAH2O95865 285 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 CSTAP01040 98 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 SYPP08247 313 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 IFI30P13284 250 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 MYF5P13349 255 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 C21orf33P30042 268 aaPredicted RBP12.15□□□□□ -0.46
CPSF4-206ENST00000441580 CSTF2P33240 577 aaKnown RBP eCLIP12.15□□□□□ -0.46
CPSF4-206ENST00000441580 TGFBR2P37173 567 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 SERPINB10P48595 397 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 GPR143P51810 404 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 C1DQ13901 141 aaKnown RBP12.15□□□□□ -0.46
CPSF4-206ENST00000441580 NNATQ16517 81 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 CTF1Q16619 201 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 KLHL22Q53GT1 634 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 HLA-DQA1Q5Y7H0 255 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 TMPRSS11FQ6ZWK6 438 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 BMP8AQ7Z5Y6 402 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 GID4Q8IVV7 300 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 MAML2Q8IZL2 1156 aaPredicted RBP12.15□□□□□ -0.46
CPSF4-206ENST00000441580 C17orf47Q8NEP4 570 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 OR4N2Q8NGD1 307 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 ZNF721Q8TF20 911 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.15□□□□□ -0.46
CPSF4-206ENST00000441580 DNAJA4Q8WW22 397 aaPredicted RBP12.15□□□□□ -0.46
CPSF4-206ENST00000441580 LCORQ96JN0 433 aaPredicted RBP12.15□□□□□ -0.46
CPSF4-206ENST00000441580 LRR1Q96L50 414 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 CCDC74BQ96LY2 380 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 ZNF582Q96NG8 517 aaPredicted RBP12.15□□□□□ -0.46
CPSF4-206ENST00000441580 ZNF426Q9BUY5 554 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 OR8D2Q9GZM6 311 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 VN1R1Q9GZP7 353 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 SYNDIG1Q9H7V2 258 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 AMBNQ9NP70 447 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 UBQLN4Q9NRR5 601 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 SLC6A14Q9UN76 642 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 DIMT1Q9UNQ2 313 aaKnown RBP12.15□□□□□ -0.46
CPSF4-206ENST00000441580 ERGIC3Q9Y282 383 aa12.15□□□□□ -0.46
CPSF4-206ENST00000441580 A0A1W2PQM1 296 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 SCDO00767 359 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 TO15178 435 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 TLX2O43763 284 aaPredicted RBP12.14□□□□□ -0.47
CPSF4-206ENST00000441580 MAN1A2O60476 641 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 HCN1O60741 890 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 BCAS1O75363 584 aaPredicted RBP12.14□□□□□ -0.47
CPSF4-206ENST00000441580 PTHP01270 115 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 UBL4AP11441 157 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 CKMT1AP12532 417 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 HPGDP15428 266 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 CD36P16671 472 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 ENDOUP21128 410 aaKnown RBP12.14□□□□□ -0.47
CPSF4-206ENST00000441580 ADH7P40394 386 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 COPZ1P61923 177 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 CCL7P80098 99 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 LSM11P83369 360 aaKnown RBP eCLIP12.14□□□□□ -0.47
CPSF4-206ENST00000441580 DAB2P98082 770 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 OCA2Q04671 838 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 RAB40BQ12829 278 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 NCF4Q15080 339 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 EBPQ15125 230 aaKnown RBP12.14□□□□□ -0.47
CPSF4-206ENST00000441580 ALG10BQ5I7T1 473 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 C3orf38Q5JPI3 329 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 ARMC4Q5T2S8 1044 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 ULK3Q6PHR2 472 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 ZC3H14Q6PJT7 736 aaKnown RBP12.14□□□□□ -0.47
CPSF4-206ENST00000441580 WDR88Q6ZMY6 472 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 LINC00299Q6ZSB3 139 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 COX15Q7KZN9 410 aa12.14□□□□□ -0.47
CPSF4-206ENST00000441580 SLC29A4Q7RTT9 530 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms