RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 HBMQ6B0K9 141 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 SEZ6L2Q6UXD5 910 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 CERS6Q6ZMG9 384 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 LRRC70Q7Z2Q7 622 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 ZNF619Q8N2I2 560 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 C12orf45Q8N5I9 185 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-214ENST00000441542 SIRT6Q8N6T7 355 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 OR6T1Q8NGN1 323 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 OR5J2Q8NH18 312 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 OR52I2Q8NH67 350 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 HGDQ93099 445 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 SCAMP4Q969E2 229 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 ECHDC3Q96DC8 303 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 ZNF471Q9BX82 626 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-214ENST00000441542 MFFQ9GZY8 342 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 UCK1Q9HA47 277 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 FZD3Q9NPG1 666 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 TESQ9UGI8 421 aaKnown RBP7.04□□□□□ -1.28
HDAC9-214ENST00000441542 GLS2Q9UI32 602 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 SLC13A4Q9UKG4 626 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 FBXL3Q9UKT7 428 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 SLC6A5Q9Y345 797 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 EXOSC1Q9Y3B2 195 aaKnown RBP7.04□□□□□ -1.28
HDAC9-214ENST00000441542 PLXNA1Q9UIW2 1896 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 MKI67P46013 3256 aaKnown RBP7.04□□□□□ -1.28
HDAC9-214ENST00000441542 GON4LQ3T8J9 2241 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 OR6C68A6NDL8 312 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 ANTXRLA6NF34 631 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 ZNF705EA8MWA4 302 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-214ENST00000441542 HMGN1P05114 100 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 ARAFP10398 606 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 DCTDP32321 178 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 GJA5P36382 358 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 CTSOP43234 321 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-214ENST00000441542 PFN3P60673 137 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 SEC61A1P61619 476 aaKnown RBP7.04□□□□□ -1.28
HDAC9-214ENST00000441542 RAB40BQ12829 278 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 ZNF155Q12901 538 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-214ENST00000441542 SLBPQ14493 270 aaKnown RBP eCLIP7.04□□□□□ -1.28
HDAC9-214ENST00000441542 OCLNQ16625 522 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 SYTL3Q4VX76 610 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 PIP5KL1Q5T9C9 394 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 PRAMEF13Q5VWM6 474 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 PRICKLE2Q7Z3G6 844 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 NXPE1Q8N323 547 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 FAM26EQ8N5C1 309 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 CHST14Q8NCH0 376 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 C17orf47Q8NEP4 570 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 PXT1Q8NFP0 134 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 OR8S1Q8NH09 359 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 THAP6Q8TBB0 222 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 LGALS14Q8TCE9 139 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 FUBP3Q96I24 572 aaKnown RBP eCLIP7.04□□□□□ -1.28
HDAC9-214ENST00000441542 ZNF75AQ96N20 296 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 DERL3Q96Q80 235 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 NRTNQ99748 197 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 PTPN18Q99952 460 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 WDR77Q9BQA1 342 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-214ENST00000441542 POLDIP3Q9BY77 421 aaKnown RBP7.04□□□□□ -1.28
HDAC9-214ENST00000441542 SLC6A16Q9GZN6 736 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 TREM1Q9NP99 234 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 BIN3Q9NQY0 253 aa7.04□□□□□ -1.28
HDAC9-214ENST00000441542 PHIPQ8WWQ0 1821 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 CHD5Q8TDI0 1954 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 LOC100509620A0A075B734 347 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 CASC3O15234 703 aaKnown RBP7.03□□□□□ -1.28
HDAC9-214ENST00000441542 GREM1O60565 184 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 SNAI1O95863 264 aaPredicted RBP7.03□□□□□ -1.28
HDAC9-214ENST00000441542 FGF2P09038 288 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 RNF224P0DH78 156 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 ATF1P18846 271 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 NFYBP25208 207 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 LIMS1P48059 325 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 LUMP51884 338 aaPredicted RBP7.03□□□□□ -1.28
HDAC9-214ENST00000441542 ARF5P84085 180 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 DCAF12L2Q5VW00 463 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 RAB12Q6IQ22 244 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 ARHGAP11AQ6P4F7 1023 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 AGTRAPQ6RW13 159 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 CXXC5Q7LFL8 322 aaKnown RBP7.03□□□□□ -1.28
HDAC9-214ENST00000441542 TMED4Q7Z7H5 227 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 MYLIPQ8WY64 445 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 WBP2Q969T9 261 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 SCLYQ96I15 445 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 ALG8Q9BVK2 526 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 DNTTIP1Q9H147 329 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 SYNPO2LQ9H987 977 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 FKRPQ9H9S5 495 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 SLC22A7Q9Y694 548 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 BRCA2P51587 3418 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 GAPDHSO14556 408 aaPredicted RBP7.03□□□□□ -1.28
HDAC9-214ENST00000441542 CREBL2O60519 120 aaPredicted RBP7.03□□□□□ -1.28
HDAC9-214ENST00000441542 WDPCPO95876 746 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 SLC16A8O95907 504 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 SERPINA3P01011 423 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 CSN2P05814 226 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 CKBP12277 381 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 PRG2P13727 222 aa7.03□□□□□ -1.28
HDAC9-214ENST00000441542 PSMB1P20618 241 aaKnown RBP7.03□□□□□ -1.28
HDAC9-214ENST00000441542 RBMS1P29558 406 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms