RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 SLC5A10A0PJK1 596 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 LGALS8O00214 317 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 HMGN4O00479 90 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 TFP02787 698 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 ALDOBP05062 364 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 LPLP06858 475 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 ANKRD34CP0C6C1 535 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 CISD3P0C7P0 127 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 PRLHRP49683 370 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 DGCR2P98153 550 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 FLI1Q01543 452 aaPredicted RBP11.09□□□□□ -0.63
LTBR-203ENST00000441074 CNTN1Q12860 1018 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 SNTB2Q13425 540 aaKnown RBP11.09□□□□□ -0.63
LTBR-203ENST00000441074 ZSWIM7Q19AV6 140 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 UAP1L1Q3KQV9 507 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 CCSMST1Q4G0I0 132 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 KIAA1161Q6NSJ0 714 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 C6orf120Q7Z4R8 191 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 HSD17B13Q7Z5P4 300 aaPredicted RBP11.09□□□□□ -0.63
LTBR-203ENST00000441074 COMTD1Q86VU5 262 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 FAM71CQ8NEG0 241 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 HAVCR2Q8TDQ0 301 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 OR5P2Q8WZ92 322 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 ELMOD3Q96FG2 381 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 KXD1Q9BQD3 176 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 COPS3Q9UNS2 423 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 SLC9A8Q9Y2E8 581 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 A0A0G2JK05 382 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 TRABD2BA6NFA1 517 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 SLC9B1P1A6NJY1 282 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 OR2AG2A6NM03 316 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 LRRN3E7EW58 273 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 AIPO00170 330 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 TSPAN6O43657 245 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 RGS11O94810 467 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 MT-ND4P03905 459 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 HTR1FP30939 366 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 KLF9Q13886 244 aaPredicted RBP11.09□□□□□ -0.63
LTBR-203ENST00000441074 HENMT1Q5T8I9 393 aaKnown RBP11.09□□□□□ -0.63
LTBR-203ENST00000441074 B3GNTL1Q67FW5 361 aaPredicted RBP11.09□□□□□ -0.63
LTBR-203ENST00000441074 FAM83HQ6ZRV2 1179 aaPredicted RBP11.09□□□□□ -0.63
LTBR-203ENST00000441074 MMP21Q8N119 569 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 STPG2Q8N412 459 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 EIF4E3Q8N5X7 224 aaKnown RBP11.09□□□□□ -0.63
LTBR-203ENST00000441074 CLRN3Q8NCR9 226 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 SCARB1Q8WTV0 552 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 SMARCD2Q92925 531 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 PRRC1Q96M27 445 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 CDCA3Q99618 268 aaPredicted RBP11.09□□□□□ -0.63
LTBR-203ENST00000441074 TMPRSS13Q9BYE2 586 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 C20orf85Q9H1P6 137 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 LRRN3Q9H3W5 708 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 IFT22Q9H7X7 185 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 SCPEP1Q9HB40 452 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 BEX1Q9HBH7 125 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 NPDC1Q9NQX5 325 aaPredicted RBP11.09□□□□□ -0.63
LTBR-203ENST00000441074 BABAM2Q9NXR7 383 aa11.09□□□□□ -0.63
LTBR-203ENST00000441074 PDCD5O14737 125 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 NPC1O15118 1278 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 GSTZ1O43708 216 aaPredicted RBP11.08□□□□□ -0.64
LTBR-203ENST00000441074 WNT1P04628 370 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 NAT2P11245 290 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 NFYAP23511 347 aaPredicted RBP11.08□□□□□ -0.64
LTBR-203ENST00000441074 ATP6V1E1P36543 226 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 IFNGR2P38484 337 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 OR10A3P58181 314 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 TBPL1P62380 186 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 TSPAN31Q12999 210 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 SLBPQ14493 270 aaKnown RBP eCLIP11.08□□□□□ -0.64
LTBR-203ENST00000441074 ETFDHQ16134 617 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 GAB4Q2WGN9 574 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 CDC73Q6P1J9 531 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 HSD11B1LQ7Z5J1 315 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 SPICQ8N5J4 248 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 KCT2Q8NC54 265 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 UBE2E3Q969T4 207 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 NPAS1Q99742 590 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 TREX2Q9BQ50 279 aaPredicted RBP11.08□□□□□ -0.64
LTBR-203ENST00000441074 SLC6A17Q9H1V8 727 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 SFXN1Q9H9B4 322 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 MED17Q9NVC6 651 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 CLDND1Q9NY35 253 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 PIPOXQ9P0Z9 390 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 FAM8A1Q9UBU6 413 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 SIRT4Q9Y6E7 314 aaPredicted RBP11.08□□□□□ -0.64
LTBR-203ENST00000441074 DENND4CQ5VZ89 1909 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 A0A087WUU8 490 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 GSAPA4D1B5 854 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 TMEM202A6NGA9 273 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 MCRIP1C9JLW8 97 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 ABCD4O14678 606 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 SURF4O15260 269 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 PTP4A3O75365 173 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 ITGA10O75578 1167 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 C1GALT1C1LP0DN25 315 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 CD53P19397 219 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 POU3F2P20265 443 aaPredicted RBP11.08□□□□□ -0.64
LTBR-203ENST00000441074 DRD5P21918 477 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 FCARP24071 287 aa11.08□□□□□ -0.64
LTBR-203ENST00000441074 WASP42768 502 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms