RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 ELK4P28324 431 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 SLC7A1P30825 629 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 SLC6A12P48065 614 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 KCNC1P48547 511 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 ART1P52961 327 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 POU6F2P78424 691 aaPredicted RBP5.53□□□□□ -1.52
PTPRR-204ENST00000440835 IGLV3-21P80748 117 aaPredicted RBP5.53□□□□□ -1.52
PTPRR-204ENST00000440835 SORDQ00796 357 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 TRIM25Q14258 630 aaKnown RBP5.53□□□□□ -1.52
PTPRR-204ENST00000440835 SLC10A1Q14973 349 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 DUSP7Q16829 419 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 GXYLT1Q4G148 440 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 ATAD3CQ5T2N8 411 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 TMEM198Q66K66 360 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 DESI1Q6ICB0 168 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 LIN54Q6MZP7 749 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 METTL2BQ6P1Q9 378 aaKnown RBP5.53□□□□□ -1.52
PTPRR-204ENST00000440835 SBSNQ6UWP8 590 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 ARSKQ6UWY0 536 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 TMIGD1Q6UXZ0 262 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 KIF18BQ86Y91 864 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 LYSMD2Q8IV50 215 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 PM20D2Q8IYS1 436 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 ZNF565Q8N9K5 539 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 SNX31Q8N9S9 440 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 OR5T3Q8NGG3 340 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 OR5H6Q8NGV6 325 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 GOT1L1Q8NHS2 421 aaPredicted RBP5.53□□□□□ -1.52
PTPRR-204ENST00000440835 RP9Q8TA86 221 aaKnown RBP5.53□□□□□ -1.52
PTPRR-204ENST00000440835 ENKURQ8TC29 256 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 PPWD1Q96BP3 646 aaKnown RBP5.53□□□□□ -1.52
PTPRR-204ENST00000440835 MS4A6EQ96DS6 147 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 KCNC2Q96PR1 638 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 SNX18Q96RF0 628 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 TTYH2Q9BSA4 534 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 FUNDC2Q9BWH2 189 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 TTTY12Q9BZ98 90 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 SP140LQ9H930 580 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 ANKRD10Q9NXR5 420 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 EHD3Q9NZN3 535 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 CLCA3PQ9Y6N3 262 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 SCN3AQ9NY46 2000 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 PKDREJQ9NTG1 2253 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 F8P00451 2351 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 C2CD3Q4AC94 2353 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 ANKDD1BA6NHY2 528 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 UGT2B11O75310 529 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 SCO1O75880 301 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 IL18BPO95998 194 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 OR3A3P47888 321 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 ASCL1P50553 236 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 VBP1P61758 197 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 PSPHP78330 225 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 BTG2P78543 158 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 S100A12P80511 92 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 PMPCAQ10713 525 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 SNTA1Q13424 505 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 SELPLGQ14242 412 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 MLC1Q15049 377 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 CTF1Q16619 201 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 FBXO48Q5FWF7 155 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 ARL13AQ5H913 290 aaPredicted RBP5.53□□□□□ -1.52
PTPRR-204ENST00000440835 ZNF773Q6PK81 442 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 SLCO4C1Q6ZQN7 724 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 SPATC1Q76KD6 591 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 SPATA6LQ8N4H0 392 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 IL17RDQ8NFM7 739 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 OR5M3Q8NGP4 307 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 CHAC2Q8WUX2 184 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 S100ZQ8WXG8 99 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 ZFP3Q96NJ6 502 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 ATOH8Q96SQ7 321 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 EGFL8Q99944 293 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 CHID1Q9BWS9 393 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 ZNF385DQ9H6B1 395 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 POLE3Q9NRF9 147 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 ADA2Q9NZK5 511 aa5.53□□□□□ -1.52
PTPRR-204ENST00000440835 ZNF629Q9UEG4 869 aaPredicted RBP5.53□□□□□ -1.52
PTPRR-204ENST00000440835 PRORSD1PA6NEY8 169 aa5.52□□□□□ -1.53
PTPRR-204ENST00000440835 ZNF860A6NHJ4 632 aa5.52□□□□□ -1.53
PTPRR-204ENST00000440835 CYR61O00622 381 aa5.52□□□□□ -1.53
PTPRR-204ENST00000440835 SLC22A2O15244 555 aa5.52□□□□□ -1.53
PTPRR-204ENST00000440835 HS6ST1O60243 411 aa5.52□□□□□ -1.53
PTPRR-204ENST00000440835 CTAG2O75638 210 aa5.52□□□□□ -1.53
PTPRR-204ENST00000440835 CDC123O75794 336 aaPredicted RBP5.52□□□□□ -1.53
PTPRR-204ENST00000440835 OPN1MWP04001 364 aa5.52□□□□□ -1.53
PTPRR-204ENST00000440835 SERPIND1P05546 499 aa5.52□□□□□ -1.53
PTPRR-204ENST00000440835 KRT8P05787 483 aa5.52□□□□□ -1.53
PTPRR-204ENST00000440835 S100A9P06702 114 aaKnown RBP5.52□□□□□ -1.53
PTPRR-204ENST00000440835 OPN1MW2P0DN77 364 aa5.52□□□□□ -1.53
PTPRR-204ENST00000440835 OPN1MW3P0DN78 364 aa5.52□□□□□ -1.53
PTPRR-204ENST00000440835 GLI4P10075 376 aa5.52□□□□□ -1.53
PTPRR-204ENST00000440835 MAOAP21397 527 aa5.52□□□□□ -1.53
PTPRR-204ENST00000440835 FBN2P35556 2912 aa5.52□□□□□ -1.53
PTPRR-204ENST00000440835 TIMP3P35625 211 aa5.52□□□□□ -1.53
PTPRR-204ENST00000440835 POLR2GP62487 172 aaKnown RBP eCLIP5.52□□□□□ -1.53
PTPRR-204ENST00000440835 MYBPHQ13203 477 aa5.52□□□□□ -1.53
PTPRR-204ENST00000440835 CDSNQ15517 529 aa5.52□□□□□ -1.53
PTPRR-204ENST00000440835 TSNQ15631 228 aaKnown RBP5.52□□□□□ -1.53
PTPRR-204ENST00000440835 PFKFB4Q16877 469 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms