RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 RCE1Q9Y256 329 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 COL4A6Q14031 1691 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 A0A1B0GVT2 93 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 E9PI62 339 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 PRKNO60260 465 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 MPC2O95563 127 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 IFNA7P01567 189 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 PVRP15151 417 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 CBR1P16152 277 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 ANXA7P20073 488 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 ADH7P40394 386 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 ERVK-25P63136 954 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 MLLT11Q13015 90 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 SNTB2Q13425 540 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 METTL2BQ6P1Q9 378 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 TMEM81Q6P7N7 255 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 CREB3L2Q70SY1 520 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 KIF18BQ86Y91 864 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 ZNF687Q8N1G0 1237 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 MS4A15Q8N5U1 240 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 DEFB119Q8N690 84 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 PROKR2Q8NFJ6 384 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 OR6M1Q8NGM8 313 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 CCL4L1Q8NHW4 92 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 DNAJA4Q8WW22 397 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 SAMD8Q96LT4 415 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 SLC38A2Q96QD8 506 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 TMEM43Q9BTV4 400 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 ADAT1Q9BUB4 502 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 GTPBP2Q9BX10 602 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 B3GNT4Q9C0J1 378 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 PRSS16Q9NQE7 514 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 FBXL4Q9UKA2 621 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 CACNG2Q9Y698 323 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 STON1Q9Y6Q2 735 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 SLC9B1P1A6NJY1 282 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 DOK2O60496 412 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 KLHL18O94889 574 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 TFP02787 698 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 RAF1P04049 648 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 GKN3PP0CG01 181 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 TYRP1P17643 537 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 ITGB7P26010 798 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 ERVK-21P61565 698 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 TP53I3Q53FA7 332 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 BICRALQ6AI39 1079 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 RTL4Q6ZR62 310 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 LAS2Q8IYD9 372 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 CXorf40BQ96DE9 158 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 LRIG1Q96JA1 1093 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 DPAGT1Q9H3H5 408 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 PLCXD1Q9NUJ7 323 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 FKBP14Q9NWM8 211 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 KLHL42Q9P2K6 505 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 P2RX2Q9UBL9 471 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 PPIL1Q9Y3C6 166 aa9.28□□□□□ -0.92
CDC42SE1-202ENST00000439374 LINC01553A4QN01 128 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 CBX7O95931 251 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 SOD1P00441 154 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 H2AFB2P0C5Z0 115 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 ARAFP10398 606 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 IL1RNP18510 177 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 TGM3Q08188 693 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 C1orf61Q13536 156 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 CST6Q15828 149 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 ST3GAL2Q16842 350 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 LGALSLQ3ZCW2 172 aaPredicted RBP9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 MLIPQ5VWP3 458 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 OR4C11Q6IEV9 310 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 IDO2Q6ZQW0 420 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 OR4C15Q8NGM1 316 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 OR5P2Q8WZ92 322 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 CPNE2Q96FN4 548 aaPredicted RBP9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 ZNF514Q96K75 400 aaPredicted RBP9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 SFXN2Q96NB2 322 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 TEFMQ96QE5 360 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 GLIPR2Q9H4G4 154 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 C6orf106Q9H6K1 298 aaPredicted RBP9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 FKRPQ9H9S5 495 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 ZNF780BQ9Y6R6 833 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 NOTCH4Q99466 2003 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 TCRBP04435 133 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 ALPPP05187 535 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 ACSM4P0C7M7 580 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 NT5EP21589 574 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 TRIM23P36406 574 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 SLC1A3P43003 542 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 E2F1Q01094 437 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 HSF2Q03933 536 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 KCNAB1Q14722 419 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 IRF4Q15306 451 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 SLC27A4Q6P1M0 643 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 FIGNL1Q6PIW4 674 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 LINC00299Q6ZSB3 139 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 PRICKLE2Q7Z3G6 844 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 TMED4Q7Z7H5 227 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 STPG2Q8N412 459 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 OR2T4Q8NH00 348 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 SMARCD2Q92925 531 aa9.27□□□□□ -0.93
CDC42SE1-202ENST00000439374 RBPMSQ93062 196 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms