RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 RGS7BPQ6MZT1 257 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-204ENST00000438964 NXPE4Q6UWF7 544 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 ACBD7Q8N6N7 88 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 OR52I2Q8NH67 350 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 GHSRQ92847 366 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 HGDQ93099 445 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 PDCD1LG2Q9BQ51 273 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 ZNF559Q9BR84 538 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 GLIPR2Q9H4G4 154 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 TCF20Q9UGU0 1960 aaKnown RBP12.47□□□□□ -0.41
ACTN1-204ENST00000438964 BET1O15155 118 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 DUSP11O75319 330 aaKnown RBP12.47□□□□□ -0.41
ACTN1-204ENST00000438964 PEX14O75381 377 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 ATXN8OSP0DMR3 200 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 CKBP12277 381 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 F8A1P23610 371 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 PPP2R1BP30154 601 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 DCTDP32321 178 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 SMIM11AP58511 58 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 ERVK-25P63136 954 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 TAF1CQ15572 869 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-204ENST00000438964 ARSIQ5FYB1 569 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 BEX5Q5H9J7 111 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 ENTPD8Q5MY95 495 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 DNAJB7Q7Z6W7 309 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-204ENST00000438964 CACUL1Q86Y37 369 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 CXorf40BQ96DE9 158 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 CHFRQ96EP1 664 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 PRRC1Q96M27 445 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 MNTQ99583 582 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 C6orf106Q9H6K1 298 aaPredicted RBP12.47□□□□□ -0.41
ACTN1-204ENST00000438964 MRTO4Q9UKD2 239 aaKnown RBP12.47□□□□□ -0.41
ACTN1-204ENST00000438964 ASF1AQ9Y294 204 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 SCN10AQ9Y5Y9 1956 aa12.47□□□□□ -0.41
ACTN1-204ENST00000438964 KHDRBS3O75525 346 aaKnown RBP12.46□□□□□ -0.41
ACTN1-204ENST00000438964 LEFTY1O75610 366 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 THY1P04216 161 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 RAB3BP20337 219 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 GRPRP30550 384 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 PSMB10P40306 273 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 MTNR1BP49286 362 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 RPS15P62841 145 aaKnown RBP12.46□□□□□ -0.41
ACTN1-204ENST00000438964 CAMK1Q14012 370 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 ZDHHC20Q5W0Z9 365 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 BTN2A1Q7KYR7 527 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 TMEM150AQ86TG1 271 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 OR14A2Q96R54 314 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 NPAS1Q99742 590 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 PIPOXQ9P0Z9 390 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 PFDN2Q9UHV9 154 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 CENPVL1A0A0U1RR11 272 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 LRRN3E7EW58 273 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 CASC3O15234 703 aaKnown RBP12.46□□□□□ -0.41
ACTN1-204ENST00000438964 GKN3PP0CG01 181 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 NFYAP23511 347 aaPredicted RBP12.46□□□□□ -0.41
ACTN1-204ENST00000438964 PGGHGQ32M88 737 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 ZNF697Q5TEC3 545 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 RFKQ969G6 155 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 SLC25A28Q96A46 364 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 COL26A1Q96A83 441 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 PEX11GQ96HA9 241 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 PPP1R16AQ96I34 528 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 GAL3ST1Q99999 423 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 LRRN3Q9H3W5 708 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 PCDHB16Q9NRJ7 776 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 HPF1Q9NWY4 346 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 PHF11Q9UIL8 331 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 PCDHGA5Q9Y5G8 931 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 BACE2Q9Y5Z0 518 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 AP1M2Q9Y6Q5 423 aa12.46□□□□□ -0.41
ACTN1-204ENST00000438964 A0A1B0GVI7 797 aa12.46□□□□□ -0.42
ACTN1-204ENST00000438964 CDHR4A6H8M9 788 aa12.46□□□□□ -0.42
ACTN1-204ENST00000438964 H0YC42 278 aa12.46□□□□□ -0.42
ACTN1-204ENST00000438964 KIAA0355O15063 1070 aa12.46□□□□□ -0.42
ACTN1-204ENST00000438964 NAA10P41227 235 aaPredicted RBP12.46□□□□□ -0.42
ACTN1-204ENST00000438964 OMPP47874 163 aa12.46□□□□□ -0.42
ACTN1-204ENST00000438964 HLXQ14774 488 aaPredicted RBP12.46□□□□□ -0.42
ACTN1-204ENST00000438964 HEPHL1Q6MZM0 1159 aa12.46□□□□□ -0.42
ACTN1-204ENST00000438964 CDC73Q6P1J9 531 aa12.46□□□□□ -0.42
ACTN1-204ENST00000438964 IL17RCQ8NAC3 791 aa12.46□□□□□ -0.42
ACTN1-204ENST00000438964 OR51A7Q8NH64 312 aa12.46□□□□□ -0.42
ACTN1-204ENST00000438964 OR56B4Q8NH76 319 aa12.46□□□□□ -0.42
ACTN1-204ENST00000438964 PFN4Q8NHR9 129 aa12.46□□□□□ -0.42
ACTN1-204ENST00000438964 STK35Q8TDR2 534 aa12.46□□□□□ -0.42
ACTN1-204ENST00000438964 OR5P2Q8WZ92 322 aa12.46□□□□□ -0.42
ACTN1-204ENST00000438964 USB1Q9BQ65 265 aaKnown RBP12.46□□□□□ -0.42
ACTN1-204ENST00000438964 C20orf141Q9NUB4 165 aa12.46□□□□□ -0.42
ACTN1-204ENST00000438964 ZMIZ1Q9ULJ6 1067 aa12.46□□□□□ -0.42
ACTN1-204ENST00000438964 ASB4Q9Y574 426 aa12.46□□□□□ -0.42
ACTN1-204ENST00000438964 CNTRLQ7Z7A1 2325 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 NPIPA5A0A0B4J1W7 369 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 IDSB3KWA1 339 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 NPIPA7E9PJI5 369 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 SUSD5O60279 629 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 RLN2P04090 185 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 RLN1P04808 185 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 GALTP07902 379 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 NPIPA8P0DM63 369 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 LINC00303Q3SY05 128 aa12.45□□□□□ -0.42
ACTN1-204ENST00000438964 CCNJQ5T5M9 372 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms