RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 FAM240BA0A1B0GVZ2 78 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 TMEM89A2RUT3 159 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 OR6C74A6NCV1 312 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 LRIT2A6NDA9 550 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 E9PMD0 336 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 K7EQM0 130 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 SGK494L7N484 410 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 NDUFS8O00217 210 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 PHOX2AO14813 284 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 CHADO15335 359 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 GJB5O95377 273 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 IGSF6O95976 241 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 THY1P04216 161 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 UGT2B4P06133 528 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 UMPSP11172 480 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 NCF2P19878 526 aaPredicted RBP2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 ANXA13P27216 316 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 DPP4P27487 766 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 PTPN4P29074 926 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 AXLP30530 894 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 PRKAR2BP31323 418 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 LONP1P36776 959 aaKnown RBP2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 TAGLN2P37802 199 aaKnown RBP2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 PRRX1P54821 245 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 NAPAP54920 295 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 DSTNP60981 165 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 TNFRSF17Q02223 184 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 COTL1Q14019 142 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 EIF2B1Q14232 305 aaKnown RBP2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 LTB4RQ15722 352 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 SSX2Q16385 188 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 ZSWIM7Q19AV6 140 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 ZNF528Q3MIS6 628 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 USH1GQ495M9 461 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 CCDC14Q49A88 953 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 SLC22A6Q4U2R8 563 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 MS4A13Q5J8X5 152 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 NCR3LG1Q68D85 454 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 PRR5LQ6MZQ0 368 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 TMEM26Q6ZUK4 368 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 EFL1Q7Z2Z2 1120 aaKnown RBP2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 P4HA3Q7Z4N8 544 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 COMTD1Q86VU5 262 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 ERO1BQ86YB8 467 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 SLC22A9Q8IVM8 553 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 ZBED8Q8IZ13 594 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 RNF10Q8N5U6 811 aaKnown RBP2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 NECAB1Q8N987 351 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 WDR36Q8NI36 951 aaKnown RBP2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 DQX1Q8TE96 717 aaKnown RBP2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 TMIGD2Q96BF3 282 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 C19orf60Q96EN9 201 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 SENP8Q96LD8 212 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 ZNF607Q96SK3 696 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 MTG1Q9BT17 334 aaPredicted RBP2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 WRAP53Q9BUR4 548 aaKnown RBP2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 FAM192AQ9GZU8 254 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 ADGRL4Q9HBW9 690 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 SDHAF3Q9NRP4 125 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 FKBP14Q9NWM8 211 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 KLRF1Q9NZS2 232 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 EMC3Q9P0I2 261 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 FZR1Q9UM11 496 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 STK38LQ9Y2H1 464 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 RNF115Q9Y4L5 304 aa2.89□□□□□ -1.95
LSM1P1-201ENST00000438629 PLEKHG2Q9H7P9 1386 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 HCFC1P51610 2035 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 PTCH1Q13635 1447 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 A0A075B6Q4 140 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 LOC100653049A0A140TA62 436 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 ZSCAN5BA6NJL1 495 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 EFCAB7A8K855 629 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 GOLGA8SH3BPF8 625 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 H3BTX0 84 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 LGALS8O00214 317 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 XPO1O14980 1071 aaKnown RBP2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 NVLO15381 856 aaKnown RBP2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 SULT1B1O43704 296 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 LCMT2O60294 686 aaKnown RBP2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 CACNG3O60359 315 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 B4GALT2O60909 372 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 NIPSNAP2O75323 286 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 ZNF253O75346 499 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 ZNF189O75820 626 aaPredicted RBP2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 KRT34O76011 436 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 IGHV3-9P01782 118 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 KRT14P02533 472 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 CLUP10909 449 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 PGAM2P15259 253 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 PRKACBP22694 351 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 AKT2P31751 481 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 CCR1P32246 355 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 MNAT1P51948 309 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 ARHGDIBP52566 201 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 IST1P53990 364 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 AIF1P55008 147 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 RAG2P55895 527 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 CARD18P57730 90 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 MYL6P60660 151 aa2.88□□□□□ -1.95
LSM1P1-201ENST00000438629 RPS8P62241 208 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms