RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 ACKR4Q9NPB9 350 aa9.71□□□□□ -0.85
SHPRH-206ENST00000438092 AQP9O43315 295 aa9.71□□□□□ -0.85
SHPRH-206ENST00000438092 NDUFB2O95178 105 aa9.71□□□□□ -0.85
SHPRH-206ENST00000438092 C1orf105O95561 183 aa9.71□□□□□ -0.85
SHPRH-206ENST00000438092 HMGN2P05204 90 aaKnown RBP9.71□□□□□ -0.85
SHPRH-206ENST00000438092 RAB4AP20338 218 aa9.71□□□□□ -0.85
SHPRH-206ENST00000438092 ETV4P43268 484 aa9.71□□□□□ -0.85
SHPRH-206ENST00000438092 MAGEA6P43360 314 aa9.71□□□□□ -0.85
SHPRH-206ENST00000438092 OR1D5P58170 312 aa9.71□□□□□ -0.85
SHPRH-206ENST00000438092 SPOCK1Q08629 439 aa9.71□□□□□ -0.85
SHPRH-206ENST00000438092 CD163Q86VB7 1156 aa9.71□□□□□ -0.85
SHPRH-206ENST00000438092 QRSL1Q9H0R6 528 aaKnown RBP9.71□□□□□ -0.85
SHPRH-206ENST00000438092 PRDM9Q9NQV7 894 aa9.71□□□□□ -0.85
SHPRH-206ENST00000438092 CCM2LQ9NUG4 571 aaPredicted RBP9.71□□□□□ -0.85
SHPRH-206ENST00000438092 B3GNT3Q9Y2A9 372 aa9.71□□□□□ -0.85
SHPRH-206ENST00000438092 CNTRLQ7Z7A1 2325 aa9.71□□□□□ -0.85
SHPRH-206ENST00000438092 AGPAT2O15120 278 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 NKX2-5P52952 324 aaPredicted RBP9.71□□□□□ -0.86
SHPRH-206ENST00000438092 FXNQ16595 210 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 OR8J1Q8NGP2 316 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 OR1J4Q8NGS1 313 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 LGALS12Q96DT0 336 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 TXNDC15Q96J42 360 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 OR7D2Q96RA2 312 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 SULT4A1Q9BR01 284 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 PINK1Q9BXM7 581 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 KLHL13Q9P2N7 655 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 PRKRAO75569 313 aaKnown RBP9.71□□□□□ -0.86
SHPRH-206ENST00000438092 OXSR1O95747 527 aaPredicted RBP9.71□□□□□ -0.86
SHPRH-206ENST00000438092 RAB3AP20336 220 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 POU3F1Q03052 451 aaPredicted RBP9.71□□□□□ -0.86
SHPRH-206ENST00000438092 TMEM176BQ3YBM2 270 aaPredicted RBP9.71□□□□□ -0.86
SHPRH-206ENST00000438092 TRIM61Q5EBN2 209 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 CREB3L1Q96BA8 519 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 C7orf50Q9BRJ6 194 aaKnown RBP9.71□□□□□ -0.86
SHPRH-206ENST00000438092 LRFN1Q9P244 771 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 PRDM4Q9UKN5 801 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 MROH6A6NGR9 719 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 GGT1P19440 569 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 MSR1P21757 451 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 CAMK2DQ13557 499 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 SF3A2Q15428 464 aaKnown RBP9.71□□□□□ -0.86
SHPRH-206ENST00000438092 NIPAL3Q6P499 406 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 TANKQ92844 425 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 POTEKPQ9BYX7 375 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 MYNNQ9NPC7 610 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 SMOXQ9NWM0 555 aa9.71□□□□□ -0.86
SHPRH-206ENST00000438092 ZNF223Q9UK11 482 aaPredicted RBP9.71□□□□□ -0.86
SHPRH-206ENST00000438092 GABRR3A8MPY1 467 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 DVL2O14641 736 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 ZFAND5O76080 213 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 IGHV3-9P01782 118 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 DDCP20711 480 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 GPR50Q13585 617 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 C10orf62Q5T681 223 aaPredicted RBP9.7□□□□□ -0.86
SHPRH-206ENST00000438092 DPPA4Q7L190 304 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 TECPR1Q7Z6L1 1165 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 FAM160A2Q8N612 972 aaPredicted RBP9.7□□□□□ -0.86
SHPRH-206ENST00000438092 CDRT4Q8N9R6 151 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 SFXN5Q8TD22 340 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 DCUN1D4Q92564 292 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 MED20Q9H944 212 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 FAM86C1Q9NVL1 165 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 TESQ9UGI8 421 aaKnown RBP9.7□□□□□ -0.86
SHPRH-206ENST00000438092 DUSP13Q9UII6 198 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 NUP188Q5SRE5 1749 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 STK17BO94768 372 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 EDN1P05305 212 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 PTPN6P29350 595 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 CRABP1P29762 137 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 AHRP35869 848 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 RGRP47804 291 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 BMXP51813 675 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 CLDN17P56750 224 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 ESCO2Q56NI9 601 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 MARVELD2Q8N4S9 558 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 BBS1Q8NFJ9 593 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 UBQLN2Q9UHD9 624 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 PCDHA9Q9Y5H5 950 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 CREBL2O60519 120 aaPredicted RBP9.7□□□□□ -0.86
SHPRH-206ENST00000438092 MRPL33O75394 65 aaKnown RBP9.7□□□□□ -0.86
SHPRH-206ENST00000438092 SERPINA7P05543 415 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 C1SP09871 688 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 DNASE1P24855 282 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 PRPS1P60891 318 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 DMWDQ09019 674 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 GAB1Q13480 694 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 TDGQ13569 410 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 CEACAM7Q14002 265 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 DCP2Q8IU60 420 aaKnown RBP9.7□□□□□ -0.86
SHPRH-206ENST00000438092 ASCC1Q8N9N2 400 aaKnown RBP9.7□□□□□ -0.86
SHPRH-206ENST00000438092 DUSP19Q8WTR2 217 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 C4orf36Q96KX1 117 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 C1QTNF6Q9BXI9 259 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 MFRPQ9BY79 579 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 CBLCQ9ULV8 474 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 A0A087WUU8 490 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 OR6C6A6NF89 314 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 IFNA17P01571 189 aa9.7□□□□□ -0.86
SHPRH-206ENST00000438092 RPS17P08708 135 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms