RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ACOT11Q8WXI4 607 aaPredicted RBP10.56□□□□□ -0.72
SCN4A-201ENST00000435607 RBMXL1Q96E39 390 aaKnown RBP10.56□□□□□ -0.72
SCN4A-201ENST00000435607 MAGIXQ9H6Y5 334 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 MCRIP1C9JLW8 97 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 ADAM23O75077 832 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 SCO1O75880 301 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 ITGB7P26010 798 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 ARL11Q969Q4 196 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 INTS14Q96SY0 518 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 TMEM246Q9BRR3 403 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 SHARPINQ9H0F6 387 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 POT1Q9NUX5 634 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 TCHHQ07283 1943 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 HOXC13P31276 330 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 GGT5P36269 586 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 XCR1P46094 333 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 DCDP81605 110 aaKnown RBP10.56□□□□□ -0.72
SCN4A-201ENST00000435607 DOC2AQ14183 400 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 GK3PQ14409 553 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 EPGNQ6UW88 154 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 TMEM184AQ6ZMB5 413 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 OSTM1Q86WC4 334 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 FNDC8Q8TC99 324 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 IL17FQ96PD4 163 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 GPR62Q9BZJ7 368 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 KCNK12Q9HB15 430 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 KCNIP2Q9NS61 270 aa10.56□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF587BE7ETH6 402 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 SCRG1O75711 98 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 TPOP07202 933 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 BCKDHBP21953 392 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 CDKN2CP42773 168 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 SUB1P53999 127 aaKnown RBP eCLIP10.55□□□□□ -0.72
SCN4A-201ENST00000435607 RABL3Q5HYI8 236 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 PDZD9Q8IXQ8 264 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 MINDY1Q8N5J2 469 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 FAM160A2Q8N612 972 aaPredicted RBP10.55□□□□□ -0.72
SCN4A-201ENST00000435607 MAELQ96JY0 434 aaKnown RBP10.55□□□□□ -0.72
SCN4A-201ENST00000435607 RANBP9Q96S59 729 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 OCSTAMPQ9BR26 566 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 FKRPQ9H9S5 495 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 PXDNQ92626 1479 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 CKMT2P17540 419 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 PPP5CP53041 499 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 CTC1Q2NKJ3 1217 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 RNF220Q5VTB9 566 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 PRICKLE2Q7Z3G6 844 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 DCUN1D4Q92564 292 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 RNF170Q96K19 258 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 PRRT1Q99946 306 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 SLC23A2Q9UGH3 650 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 PRKACBP22694 351 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 HTR5AP47898 357 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 FRMPD2BQ6IN97 320 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 OR6F1Q8NGZ6 308 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 DDX1Q92499 740 aaKnown RBP10.55□□□□□ -0.72
SCN4A-201ENST00000435607 EBF2Q9HAK2 575 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 H0YAE9 185 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 ARHGEF15O94989 841 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 SLC10A3P09131 477 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 SPHARQ15513 63 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 KIAA1211LQ6NV74 962 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 ZFPM2Q8WW38 1151 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 FGGYQ96C11 551 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 IMP4Q96G21 291 aaKnown RBP10.55□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF419Q96HQ0 510 aaPredicted RBP10.55□□□□□ -0.72
SCN4A-201ENST00000435607 GLTPQ9NZD2 209 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 PCDHA9Q9Y5H5 950 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 SIGLEC6O43699 453 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 PPP1R3DO95685 299 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 AKR1C1Q04828 323 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 C6orf136Q5SQH8 315 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 DPY19L2P1Q6NXN4 242 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 PLBD1Q6P4A8 553 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF597Q96LX8 424 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 TRAV18A0A075B6X5 111 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF736B4DX44 427 aaPredicted RBP10.55□□□□□ -0.72
SCN4A-201ENST00000435607 KCNK2O95069 426 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 FGF4P08620 206 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 IL4RP24394 825 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 CHATP28329 748 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 PTPN6P29350 595 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 ZNF181Q2M3W8 571 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 PTCRAQ6ISU1 281 aaPredicted RBP10.55□□□□□ -0.72
SCN4A-201ENST00000435607 ASRGL1Q7L266 308 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 SCCPDHQ8NBX0 429 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 IP6K3Q96PC2 410 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 PHOX2BQ99453 314 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 IKZF4Q9H2S9 585 aa10.55□□□□□ -0.72
SCN4A-201ENST00000435607 PLIN4Q96Q06 1357 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 HPRP00739 348 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 DUSP7Q16829 419 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 FBXW12Q6X9E4 464 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 PRR22Q8IZ63 422 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 SLC35B2Q8TB61 432 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 MYEF2Q9P2K5 600 aaKnown RBP10.54□□□□□ -0.72
SCN4A-201ENST00000435607 SLIT2O94813 1529 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 ETV6P41212 452 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 PTGIRP43119 386 aa10.54□□□□□ -0.72
SCN4A-201ENST00000435607 CSN1S1P47710 185 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms