RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 RIPK1Q13546 671 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 ELAVL3Q14576 367 aaKnown RBP1.56□□□□□ -2.16
CDC40-204ENST00000431461 ARL6IP1Q15041 203 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 TRIP10Q15642 601 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 ZKSCAN8Q15776 578 aaPredicted RBP1.56□□□□□ -2.16
CDC40-204ENST00000431461 RABGAP1LQ5R372 815 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 PNCKQ6P2M8 343 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 ARCQ7LC44 396 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 C16orf62Q7Z3J2 963 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 TMEM179BQ7Z7N9 219 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 ZNF573Q86YE8 665 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 NAXDQ8IW45 347 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 ZNF100Q8IYN0 542 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 SYT14Q8NB59 555 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 BBS1Q8NFJ9 593 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 OR9A4Q8NGU2 314 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 LINC01006Q8NI28 216 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 TRUB1Q8WWH5 349 aaKnown RBP1.56□□□□□ -2.16
CDC40-204ENST00000431461 SELENOMQ8WWX9 145 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 NEIL2Q969S2 332 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 SH3YL1Q96HL8 342 aaPredicted RBP1.56□□□□□ -2.16
CDC40-204ENST00000431461 OR5B2Q96R09 309 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 CITED1Q99966 193 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 THUMPD2Q9BTF0 503 aaKnown RBP1.56□□□□□ -2.16
CDC40-204ENST00000431461 TSSK1BQ9BXA7 367 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 YTHDF1Q9BYJ9 559 aaKnown RBP1.56□□□□□ -2.16
CDC40-204ENST00000431461 NAT10Q9H0A0 1025 aaKnown RBP1.56□□□□□ -2.16
CDC40-204ENST00000431461 SLITRK2Q9H156 845 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 Q9H3A6 140 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 ZDHHC11Q9H8X9 412 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 PLGRKTQ9HBL7 147 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 AGPAT5Q9NUQ2 364 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 BTNL2Q9UIR0 455 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 RPH3ALQ9UNE2 315 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 DUSP12Q9UNI6 340 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 B9D1Q9UPM9 204 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 ZNF256Q9Y2P7 627 aaPredicted RBP1.56□□□□□ -2.16
CDC40-204ENST00000431461 PLLPQ9Y342 182 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 OR10H1Q9Y4A9 318 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 MFHAS1Q9Y4C4 1052 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 OARD1Q9Y530 152 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 PPIAL4AQ9Y536 164 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 N6AMT1Q9Y5N5 214 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 ANKRD30BQ9BXX2 1392 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 ATRXP46100 2492 aa1.56□□□□□ -2.16
CDC40-204ENST00000431461 TRIOBPQ9H2D6 2365 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 PCP4L1A6NKN8 68 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 PP2D1A8MPX8 630 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 PPIAL4DF5H284 164 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 K7ENP7 123 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 CTAGE5O15320 804 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 MSH4O15457 936 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 ADAM12O43184 909 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 HCN1O60741 890 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 NOL4O94818 638 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 AK1P00568 194 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 IGLV1-47P01700 117 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 IGHV3-23P01764 117 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 HEXBP07686 556 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 ASNSP08243 561 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 RPS2P15880 293 aaKnown RBP1.55□□□□□ -2.16
CDC40-204ENST00000431461 CALB2P22676 271 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 ANXA13P27216 316 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 ADORA2BP29275 332 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 GCKP35557 465 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 TRPC1P48995 793 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 RPL8P62917 257 aaKnown RBP1.55□□□□□ -2.16
CDC40-204ENST00000431461 BCL2L1Q07817 233 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 ASPHQ12797 758 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 RAB40BQ12829 278 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 ZNF154Q13106 437 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 GANABQ14697 944 aaKnown RBP1.55□□□□□ -2.16
CDC40-204ENST00000431461 TAF7Q15545 349 aaPredicted RBP1.55□□□□□ -2.16
CDC40-204ENST00000431461 CEBPEQ15744 281 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 SLC36A3Q495N2 470 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 LDLRAP1Q5SW96 308 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 CELF3Q5SZQ8 465 aaKnown RBP1.55□□□□□ -2.16
CDC40-204ENST00000431461 OTPQ5XKR4 325 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 KRTAP5-7Q6L8G8 165 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 UFSP1Q6NVU6 142 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 SCARA5Q6ZMJ2 495 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 MOB3BQ86TA1 216 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 C17orf82Q86X59 251 aaPredicted RBP1.55□□□□□ -2.16
CDC40-204ENST00000431461 SKA3Q8IX90 412 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 NRMQ8IXM6 262 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 CCDC71LQ8N9Z2 235 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 LINC01555Q8NAE3 123 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 TRPV1Q8NER1 839 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 OR2AP1Q8NGE2 309 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 RAET1EQ8TD07 263 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 ADAMTS16Q8TE57 1224 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 PSMG2Q969U7 264 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 SYAP1Q96A49 352 aaPredicted RBP1.55□□□□□ -2.16
CDC40-204ENST00000431461 RAB3CQ96E17 227 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 SLC35E1Q96K37 410 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 SENP8Q96LD8 212 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 RANBP9Q96S59 729 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 SLC39A3Q9BRY0 314 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 SLC35A5Q9BS91 424 aa1.55□□□□□ -2.16
CDC40-204ENST00000431461 TM2D1Q9BX74 207 aa1.55□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms