RNA–Protein interactions for RNA: ENST00000430142.5

TOP3B-204, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-204ENST00000430142 OTUB1Q96FW1 271 aaPredicted RBP13.4□□□□□ -0.26
TOP3B-204ENST00000430142 C16orf58Q96GQ5 468 aa13.4□□□□□ -0.26
TOP3B-204ENST00000430142 METTL2AQ96IZ6 378 aaKnown RBP13.4□□□□□ -0.26
TOP3B-204ENST00000430142 TACO1Q9BSH4 297 aaKnown RBP13.4□□□□□ -0.26
TOP3B-204ENST00000430142 REPIN1Q9BWE0 567 aaKnown RBP13.4□□□□□ -0.26
TOP3B-204ENST00000430142 HHATLQ9HCP6 504 aa13.4□□□□□ -0.26
TOP3B-204ENST00000430142 SLC17A7Q9P2U7 560 aa13.4□□□□□ -0.26
TOP3B-204ENST00000430142 RTTNQ86VV8 2226 aa13.4□□□□□ -0.26
TOP3B-204ENST00000430142 ATRQ13535 2644 aa13.4□□□□□ -0.26
TOP3B-204ENST00000430142 OVOL3O00110 214 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 AZIN1O14977 448 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 CLOCKO15516 846 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 AKAP10O43572 662 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 TRIM13O60858 407 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 GCM2O75603 506 aaPredicted RBP13.39□□□□□ -0.27
TOP3B-204ENST00000430142 CHRNGP07510 517 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 SOD3P08294 240 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 CREB1P16220 341 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 ALDH3A1P30838 453 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 ARRB2P32121 409 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 SFTPDP35247 375 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 MANFP55145 182 aaKnown RBP13.39□□□□□ -0.27
TOP3B-204ENST00000430142 VEZF1Q14119 521 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 DUSP5Q16690 384 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 CCNJQ5T5M9 372 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 NUFIP2Q7Z417 695 aaKnown RBP13.39□□□□□ -0.27
TOP3B-204ENST00000430142 GABRG1Q8N1C3 465 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 OR6Y1Q8NGX8 325 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 B4GALNT2Q8NHY0 566 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 ABHD3Q8WU67 409 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 NEUROG1Q92886 237 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 KLHL15Q96M94 604 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 TRMOQ9BU70 441 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 MECRQ9BV79 373 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 HDHD5Q9BXW7 423 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 LRTM1Q9HBL6 345 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 UBQLN4Q9NRR5 601 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 NTMQ9P121 344 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 RNF115Q9Y4L5 304 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 DNAJC15Q9Y5T4 150 aa13.39□□□□□ -0.27
TOP3B-204ENST00000430142 TMEM233B4DJY2 109 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 SCDO00767 359 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 EFNA2O43921 213 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 FGF4P08620 206 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 LINGO3P0C6S8 592 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 DANCRP0C864 163 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 HPGDP15428 266 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 IDUAP35475 653 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 CDKN1AP38936 164 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 PRIM2P49643 509 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 DMTNQ08495 405 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 TAB1Q15750 504 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 CD226Q15762 336 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 ZNF239Q16600 458 aaKnown RBP13.38□□□□□ -0.27
TOP3B-204ENST00000430142 TMEM201Q5SNT2 666 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 NCMAPQ5T1S8 102 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 SFRP5Q5T4F7 317 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 HEPHL1Q6MZM0 1159 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 WDR93Q6P2C0 686 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 TFAP2EQ6VUC0 442 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 ATG4DQ86TL0 474 aaPredicted RBP13.38□□□□□ -0.27
TOP3B-204ENST00000430142 MISPQ8IVT2 679 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 TUSC5Q8IXB3 177 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 ZNF619Q8N2I2 560 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 ZFP28Q8NHY6 868 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 RNF128Q8TEB7 428 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 SMAP2Q8WU79 429 aaPredicted RBP13.38□□□□□ -0.27
TOP3B-204ENST00000430142 FBXW5Q969U6 566 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 PPCDCQ96CD2 204 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 ZBED6CLQ96FA7 236 aaPredicted RBP13.38□□□□□ -0.27
TOP3B-204ENST00000430142 TRMT61AQ96FX7 289 aaKnown RBP13.38□□□□□ -0.27
TOP3B-204ENST00000430142 ZNF764Q96H86 408 aaPredicted RBP13.38□□□□□ -0.27
TOP3B-204ENST00000430142 MS4A4EQ96PG1 132 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 SRXN1Q9BYN0 137 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 REG4Q9BYZ8 158 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 IQCGQ9H095 443 aaKnown RBP13.38□□□□□ -0.27
TOP3B-204ENST00000430142 REEP4Q9H6H4 257 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 C1orf109Q9NX04 203 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 SH3BP4Q9P0V3 963 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 BAIAP2L1Q9UHR4 511 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 MID2Q9UJV3 735 aa13.38□□□□□ -0.27
TOP3B-204ENST00000430142 SLC28A1O00337 649 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 LSM1O15116 133 aaKnown RBP13.37□□□□□ -0.27
TOP3B-204ENST00000430142 NPHS1O60500 1241 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 TBX19O60806 448 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 SPAG7O75391 227 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 ADAP00813 363 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 CD3EP07766 207 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 ALOX5P09917 674 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 PABPC4LP0CB38 370 aaKnown RBP13.37□□□□□ -0.27
TOP3B-204ENST00000430142 SDC1P18827 310 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 EFNA1P20827 205 aaPredicted RBP13.37□□□□□ -0.27
TOP3B-204ENST00000430142 IL32P24001 234 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 FRKP42685 505 aaPredicted RBP13.37□□□□□ -0.27
TOP3B-204ENST00000430142 SERPINB4P48594 390 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 RNF144AP50876 292 aaPredicted RBP13.37□□□□□ -0.27
TOP3B-204ENST00000430142 FOXF1Q12946 379 aa13.37□□□□□ -0.27
TOP3B-204ENST00000430142 RFTN2Q52LD8 501 aaPredicted RBP13.37□□□□□ -0.27
TOP3B-204ENST00000430142 ARL13AQ5H913 290 aaPredicted RBP13.37□□□□□ -0.27
TOP3B-204ENST00000430142 EMBQ6PCB8 327 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms