RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 MYO18BQ8IUG5 2567 aa3.61□□□□□ -1.83
HMGB3-203ENST00000430118 NID2Q14112 1375 aa3.61□□□□□ -1.83
HMGB3-203ENST00000430118 SYNJ2BP-COX16A0A087WUM0 186 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 VPS37CA5D8V6 355 aaPredicted RBP3.6□□□□□ -1.83
HMGB3-203ENST00000430118 TMEM150BA6NC51 233 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 OR6C65A6NJZ3 312 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 SIGLEC16A6NMB1 481 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 SNTNA6NMZ2 147 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 MIF4GDA9UHW6 222 aaKnown RBP3.6□□□□□ -1.83
HMGB3-203ENST00000430118 H3BMM5 538 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 SLC9A3R1O14745 358 aaPredicted RBP3.6□□□□□ -1.83
HMGB3-203ENST00000430118 XPO1O14980 1071 aaKnown RBP3.6□□□□□ -1.83
HMGB3-203ENST00000430118 BET1O15155 118 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 EPHB6O15197 1021 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 PFDN6O15212 129 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 ATP5HO75947 161 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 AKR7A3O95154 331 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 OR5F1O95221 314 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 SEC24AO95486 1093 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 KLF8O95600 359 aaPredicted RBP3.6□□□□□ -1.83
HMGB3-203ENST00000430118 CRYZL1O95825 349 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 IFNB1P01574 187 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 EPOP01588 193 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 NR3C1P04150 777 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 EDN1P05305 212 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 TPBGLP0DKB5 382 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 ODC1P11926 461 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 GZMAP12544 262 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 CCNB1P14635 433 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 CRABP2P29373 138 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 PKLRP30613 574 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 NUDT1P36639 197 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 VHLP40337 213 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 SLC1A3P43003 542 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 MAGEA4P43358 317 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 BRCC3P46736 316 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 DNA2P51530 1060 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 DVL1P1P54792 670 aaPredicted RBP3.6□□□□□ -1.83
HMGB3-203ENST00000430118 OR1D5P58170 312 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 NCALDP61601 193 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 MRPS15P82914 257 aaKnown RBP3.6□□□□□ -1.83
HMGB3-203ENST00000430118 GNA13Q14344 377 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 MOGQ16653 247 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 KLHL38Q2WGJ6 581 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 AGBL2Q5U5Z8 902 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 HIST2H2AA3Q6FI13 130 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 NIPAL1Q6NVV3 410 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 RWDD4Q6NW29 188 aaKnown RBP3.6□□□□□ -1.83
HMGB3-203ENST00000430118 FAM173BQ6P4H8 233 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 DHRS11Q6UWP2 260 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 FOXL2NBQ6ZUU3 175 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 ASRGL1Q7L266 308 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 C16orf82Q7Z2V1 217 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 NET1Q7Z628 596 aaPredicted RBP3.6□□□□□ -1.83
HMGB3-203ENST00000430118 C17orf64Q86WR6 236 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 MMAAQ8IVH4 418 aaKnown RBP3.6□□□□□ -1.83
HMGB3-203ENST00000430118 VSTM4Q8IW00 320 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 TBC1D21Q8IYX1 336 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 MMGT1Q8N4V1 131 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 DNAJC22Q8N4W6 341 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 CCDC185Q8N715 623 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 ATP6V0D2Q8N8Y2 350 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 LRTM2Q8N967 370 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 TRPV3Q8NET8 790 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 OR6M1Q8NGM8 313 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 LILRB4Q8NHJ6 448 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 SPPL2BQ8TCT7 592 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 PYROXD1Q8WU10 500 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 RASSF5Q8WWW0 418 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 RLN3Q8WXF3 142 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 CRYGNQ8WXF5 182 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 C11orf24Q96F05 449 aaPredicted RBP3.6□□□□□ -1.83
HMGB3-203ENST00000430118 ATP6V1G3Q96LB4 118 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 BIRC8Q96P09 236 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 PGLYRP2Q96PD5 576 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 USP28Q96RU2 1077 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 LPAR4Q99677 370 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 TXN2Q99757 166 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 CCDC3Q9BQI4 270 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 ERP44Q9BS26 406 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 CCSER1Q9C0I3 900 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 DPEP2Q9H4A9 486 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 HPS4Q9NQG7 708 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 DIABLOQ9NR28 239 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 ETNK2Q9NVF9 386 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 OR6C2Q9NZP2 312 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 EMC3Q9P0I2 261 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 ADAM22Q9P0K1 906 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 UVRAGQ9P2Y5 699 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 ASIC3Q9UHC3 531 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 PLA2G4CQ9UP65 541 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 IFT52Q9Y366 437 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 ANGPTL3Q9Y5C1 460 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 COLEC10Q9Y6Z7 277 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 HECTD1Q9ULT8 2610 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 EML5Q05BV3 1969 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 THADAQ6YHU6 1953 aa3.6□□□□□ -1.83
HMGB3-203ENST00000430118 ACACAQ13085 2346 aa3.59□□□□□ -1.83
HMGB3-203ENST00000430118 KIF26AQ9ULI4 1882 aaPredicted RBP3.59□□□□□ -1.83
HMGB3-203ENST00000430118 A0A087WZY1 265 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms