RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 CCDC28BQ9BUN5 200 aa2.4□□□□□ -2.03
HMGB1P9-201ENST00000429856 PKIBQ9C010 78 aa2.4□□□□□ -2.03
HMGB1P9-201ENST00000429856 COMMD4Q9H0A8 199 aa2.4□□□□□ -2.03
HMGB1P9-201ENST00000429856 UPF3AQ9H1J1 476 aaKnown RBP2.4□□□□□ -2.03
HMGB1P9-201ENST00000429856 LRRN3Q9H3W5 708 aa2.4□□□□□ -2.03
HMGB1P9-201ENST00000429856 EXO5Q9H790 373 aa2.4□□□□□ -2.03
HMGB1P9-201ENST00000429856 ANKRA2Q9H9E1 313 aa2.4□□□□□ -2.03
HMGB1P9-201ENST00000429856 SGK2Q9HBY8 427 aa2.4□□□□□ -2.03
HMGB1P9-201ENST00000429856 SLC17A5Q9NRA2 495 aa2.4□□□□□ -2.03
HMGB1P9-201ENST00000429856 DEPPQ9NTK1 212 aa2.4□□□□□ -2.03
HMGB1P9-201ENST00000429856 IL36GQ9NZH8 169 aa2.4□□□□□ -2.03
HMGB1P9-201ENST00000429856 ASIC3Q9UHC3 531 aa2.4□□□□□ -2.03
HMGB1P9-201ENST00000429856 ADAM28Q9UKQ2 775 aa2.4□□□□□ -2.03
HMGB1P9-201ENST00000429856 PIGLQ9Y2B2 252 aa2.4□□□□□ -2.03
HMGB1P9-201ENST00000429856 WDR45Q9Y484 360 aa2.4□□□□□ -2.03
HMGB1P9-201ENST00000429856 EIF4G1Q04637 1599 aaKnown RBP2.4□□□□□ -2.03
HMGB1P9-201ENST00000429856 MEX3AA1L020 520 aaKnown RBP2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 WRBO00258 174 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 ABCD4O14678 606 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 LCMT2O60294 686 aaKnown RBP2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 MTRF1O75570 445 aaKnown RBP2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 UPK3AO75631 287 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 SORBS2O94875 1100 aaKnown RBP2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 AGTP01019 485 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 IGHV3-9P01782 118 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 HCKP08631 526 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 HOXB7P09629 217 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 SLC2A3P11169 496 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 PRKACGP22612 351 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 PTBP1P26599 531 aaKnown RBP eCLIP2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 HOXD10P28358 340 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 STK19P49842 368 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 ATP1B3P54709 279 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 TMEM50BP56557 158 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 CARD18P57730 90 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 PEX6Q13608 980 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 CUL1Q13616 776 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 VGLL4Q14135 290 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 EIF2B1Q14232 305 aaKnown RBP2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 FASTKD3Q14CZ7 662 aaKnown RBP2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 RAB35Q15286 201 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 ALKBH6Q3KRA9 238 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 OR2A2Q6IF42 318 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 FAM71F2Q6NXP2 309 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 C3P1Q6ZMU1 363 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 GDPGP1Q6ZNW5 385 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 CCDC80Q76M96 950 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 TSEN54Q7Z6J9 526 aaKnown RBP2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 TMCO2Q7Z6W1 182 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 BIVMQ86UB2 503 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 ECHDC2Q86YB7 292 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 OFCC1Q8IZS5 231 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 LYG1Q8N1E2 194 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 CLDN19Q8N6F1 224 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 ALLCQ8N6M5 410 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 ZNF781Q8N8C0 355 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 DRAXINQ8NBI3 349 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 MFSD9Q8NBP5 474 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 CATSPER1Q8NEC5 780 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 NUP37Q8NFH4 326 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 OR2T33Q8NG76 320 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 OR9K2Q8NGE7 335 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 OR51G2Q8NGK0 314 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 OR10G7Q8NGN6 311 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 SLC2A14Q8TDB8 520 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 ST8SIA1Q92185 356 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 C18orf12Q96KH6 178 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 PANX1Q96RD7 426 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 SLC6A7Q99884 636 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 VGLL1Q99990 258 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 CHRDL1Q9BU40 450 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 NUP58Q9BVL2 599 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 GLIPR2Q9H4G4 154 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 EHD1Q9H4M9 534 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 VCPKMTQ9H867 229 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 POLE4Q9NR33 117 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 MRPL39Q9NYK5 338 aaKnown RBP2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 SPATA7Q9P0W8 599 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 PAK5Q9P286 719 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 RCOR3Q9P2K3 495 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 SEC14L3Q9UDX4 400 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 SUN2Q9UH99 717 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 CYTH4Q9UIA0 394 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 ZNF639Q9UID6 485 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 NTNG1Q9Y2I2 539 aa2.39□□□□□ -2.03
HMGB1P9-201ENST00000429856 TMEM94Q12767 1356 aa2.38□□□□□ -2.03
HMGB1P9-201ENST00000429856 TNIKQ9UKE5 1360 aa2.38□□□□□ -2.03
HMGB1P9-201ENST00000429856 TRGV8A0A0C4DH27 118 aa2.38□□□□□ -2.03
HMGB1P9-201ENST00000429856 TEX48A0A1B0GUV7 120 aa2.38□□□□□ -2.03
HMGB1P9-201ENST00000429856 FAM240BA0A1B0GVZ2 78 aa2.38□□□□□ -2.03
HMGB1P9-201ENST00000429856 MPTX1A8MV57 137 aa2.38□□□□□ -2.03
HMGB1P9-201ENST00000429856 ARHGEF33A8MVX0 844 aa2.38□□□□□ -2.03
HMGB1P9-201ENST00000429856 E9PQ18 207 aa2.38□□□□□ -2.03
HMGB1P9-201ENST00000429856 KIF2AO00139 706 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P9-201ENST00000429856 TAPBPO15533 448 aa2.38□□□□□ -2.03
HMGB1P9-201ENST00000429856 SNAP91O60641 907 aa2.38□□□□□ -2.03
HMGB1P9-201ENST00000429856 SEMA4FO95754 770 aa2.38□□□□□ -2.03
HMGB1P9-201ENST00000429856 TSPAN12O95859 305 aa2.38□□□□□ -2.03
HMGB1P9-201ENST00000429856 IGFBP1P08833 259 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P9-201ENST00000429856 TPM1P09493 284 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms