RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 CSNK1G3Q9Y6M4 447 aa12.69□□□□□ -0.38
THBS3-202ENST00000428962 A0A0C4DFX4 3053 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 NPIPA5A0A0B4J1W7 369 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 TRDV1A0A1B0GX56 115 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 SHISA7A6NL88 538 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 NPIPA7E9PJI5 369 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 PLD2O14939 933 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 CHP2O43745 196 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 HCN1O60741 890 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 NPIPA8P0DM63 369 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 RBM34P42696 430 aaKnown RBP12.68□□□□□ -0.38
THBS3-202ENST00000428962 CTBP2P56545 445 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 BDH1Q02338 343 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 HNRNPA0Q13151 305 aaKnown RBP12.68□□□□□ -0.38
THBS3-202ENST00000428962 PRTGQ2VWP7 1150 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 CD200R1LQ6Q8B3 271 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 WDR88Q6ZMY6 472 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 Q6ZS52 159 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 SYT13Q7L8C5 426 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 ZNF438Q7Z4V0 828 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 CPOQ8IVL8 374 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 ZNF595Q8IYB9 648 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 LNX2Q8N448 690 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 ARHGEF39Q8N4T4 335 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 ZNF485Q8NCK3 441 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 OR4F15Q8NGB8 312 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 PFN4Q8NHR9 129 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 SLC35B4Q969S0 331 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 TMEM203Q969S6 136 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 BPIFA2Q96DR5 249 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 TCTN2Q96GX1 697 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 UCK1Q9HA47 277 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 FOLH1BQ9HBA9 442 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 FAM60AQ9NP50 221 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 HINT3Q9NQE9 182 aaKnown RBP12.68□□□□□ -0.38
THBS3-202ENST00000428962 FBXO34Q9NWN3 711 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 ERVK13-1Q9NX77 482 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 BAIAP2Q9UQB8 552 aa12.68□□□□□ -0.38
THBS3-202ENST00000428962 CLDN4O14493 209 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 BHLHE40O14503 412 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 ZNF217O75362 1048 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 HLA-DPB1P04440 258 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 ZGLP1P0C6A0 271 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 GAAP10253 952 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 SAGP10523 405 aaPredicted RBP12.67□□□□□ -0.38
THBS3-202ENST00000428962 MAKP20794 623 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 GALP22466 123 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 PSMD4P55036 377 aaKnown RBP12.67□□□□□ -0.38
THBS3-202ENST00000428962 STX4Q12846 297 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 COL9A2Q14055 689 aaPredicted RBP12.67□□□□□ -0.38
THBS3-202ENST00000428962 ELOCQ15369 112 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 NIPAL3Q6P499 406 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 SMARCD3Q6STE5 483 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 LHFPL3Q86UP9 236 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 TSTD1Q8NFU3 115 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 ASB15Q8WXK1 588 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 RIT1Q92963 219 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 OTULINQ96BN8 352 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 RBM18Q96H35 190 aaKnown RBP12.67□□□□□ -0.38
THBS3-202ENST00000428962 SECISBP2Q96T21 854 aaKnown RBP12.67□□□□□ -0.38
THBS3-202ENST00000428962 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.67□□□□□ -0.38
THBS3-202ENST00000428962 TRIM2Q9C040 744 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 INPP5EQ9NRR6 644 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.67□□□□□ -0.38
THBS3-202ENST00000428962 IL20RAQ9UHF4 553 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 CAB39Q9Y376 341 aaPredicted RBP12.67□□□□□ -0.38
THBS3-202ENST00000428962 A0A0B4J2E0 115 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 A0A1B0GX12 115 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 SLC9B1P1A6NJY1 282 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 PRAMEF2O60811 474 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 CTNSO60931 367 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 SLC2A10O95528 541 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 CAPZBP47756 277 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 FASLGP48023 281 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 MXD1Q05195 221 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.67□□□□□ -0.38
THBS3-202ENST00000428962 PDZK1Q5T2W1 519 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 DDI2Q5TDH0 399 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 PLBD1Q6P4A8 553 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 MEPCEQ7L2J0 689 aaKnown RBP12.67□□□□□ -0.38
THBS3-202ENST00000428962 ZNF550Q7Z398 422 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 GKN2Q86XP6 184 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 LAX1Q8IWV1 398 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 OR8H2Q8N162 312 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 FRMD1Q8N878 549 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 ZNF614Q8N883 585 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 ZBTB8BQ8NAP8 495 aaPredicted RBP12.67□□□□□ -0.38
THBS3-202ENST00000428962 BBS1Q8NFJ9 593 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 OR6C4Q8NGE1 309 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 ZNF578Q96N58 590 aaPredicted RBP12.67□□□□□ -0.38
THBS3-202ENST00000428962 DGAT2Q96PD7 388 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 G6PC3Q9BUM1 346 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 IFT27Q9BW83 186 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 TPK1Q9H3S4 243 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 CMC2Q9NRP2 79 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 C20orf141Q9NUB4 165 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 ASB6Q9NWX5 421 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 V9GYH0 126 aa12.67□□□□□ -0.38
THBS3-202ENST00000428962 A0A0A6YYC8 382 aaPredicted RBP12.66□□□□□ -0.38
THBS3-202ENST00000428962 LILRA5A6NI73 299 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms