RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 C8orf4Q9NR00 106 aa4□□□□□ -1.77
HMGB3P5-201ENST00000428894 SERINC1Q9NRX5 453 aa4□□□□□ -1.77
HMGB3P5-201ENST00000428894 CISHQ9NSE2 258 aa4□□□□□ -1.77
HMGB3P5-201ENST00000428894 SLC39A1Q9NY26 324 aa4□□□□□ -1.77
HMGB3P5-201ENST00000428894 SPHK1Q9NYA1 384 aa4□□□□□ -1.77
HMGB3P5-201ENST00000428894 OR6C2Q9NZP2 312 aa4□□□□□ -1.77
HMGB3P5-201ENST00000428894 VPS28Q9UK41 221 aa4□□□□□ -1.77
HMGB3P5-201ENST00000428894 TSPAN16Q9UKR8 245 aa4□□□□□ -1.77
HMGB3P5-201ENST00000428894 HPCAL4Q9UM19 191 aa4□□□□□ -1.77
HMGB3P5-201ENST00000428894 GPR34Q9UPC5 381 aa4□□□□□ -1.77
HMGB3P5-201ENST00000428894 HS3ST2Q9Y278 367 aa4□□□□□ -1.77
HMGB3P5-201ENST00000428894 FADS3Q9Y5Q0 445 aa4□□□□□ -1.77
HMGB3P5-201ENST00000428894 APCP25054 2843 aa4□□□□□ -1.77
HMGB3P5-201ENST00000428894 SHANK1Q9Y566 2161 aa4□□□□□ -1.77
HMGB3P5-201ENST00000428894 DIDO1Q9BTC0 2240 aaKnown RBP3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 PVALEFA0A1B0GWK0 134 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 IGLON5A6NGN9 336 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 OR6C65A6NJZ3 312 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 SNTNA6NMZ2 147 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 GOLGA8TH3BQL2 631 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 PDXKO00764 312 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 HAT1O14929 419 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 RAD51BO15315 384 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 CALUO43852 315 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 AVILO75366 819 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 LRCH4O75427 683 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 SUPT3HO75486 399 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 CLDN11O75508 207 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 SLU7O95391 586 aaKnown RBP3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 LCA5LO95447 670 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 TGDSO95455 350 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 ADCY5O95622 1261 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 MOCS2O96007 188 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 NPPAP01160 153 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 CTSLP07711 333 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 OR2T7P0C7T2 308 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 CCL4P13236 92 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 ATP6V1B1P15313 513 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 GJB2P29033 226 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 PBLDP30039 288 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 GTF2H1P32780 548 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 ACADSBP45954 432 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 ATP5OP48047 213 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 SLC9A3P48764 834 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 SERPINB8P50452 374 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 LIMK2P53671 638 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 CDH4P55283 916 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 NFATC2Q13469 925 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 CUL1Q13616 776 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 C16orf72Q14CZ0 275 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 C14orf28Q4W4Y0 310 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 KRT39Q6A163 491 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 ENPP7Q6UWV6 458 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 TMEM207Q6UWW9 146 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 TAF8Q7Z7C8 310 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 TBC1D1Q86TI0 1168 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 VPS36Q86VN1 386 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 SPATA24Q86W54 205 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 HPS6Q86YV9 775 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 OR4D9Q8NGE8 314 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 CDC26Q8NHZ8 85 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 STARD8Q92502 1023 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 NCLNQ969V3 563 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 SGK3Q96BR1 496 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 CNDP1Q96KN2 507 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 RPRD1AQ96P16 312 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 GAL3ST1Q99999 423 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 MIS12Q9H081 205 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 SHARPINQ9H0F6 387 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 TCEAL2Q9H3H9 227 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 DPEP2Q9H4A9 486 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 OSGEPL1Q9H4B0 414 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 NCOR1P1Q9H4R4 102 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 MAGEF1Q9HAY2 307 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 DDX18Q9NVP1 670 aaKnown RBP3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 DMAC2Q9NW81 257 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 RHBDL2Q9NX52 303 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 EURLQ9NYK6 297 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 MBD2Q9UBB5 411 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 PILRAQ9UKJ1 303 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 PPP2R2CQ9Y2T4 447 aa3.99□□□□□ -1.77
HMGB3P5-201ENST00000428894 AGRNO00468 2067 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 CSMD2Q7Z408 3487 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 PDZD2O15018 2839 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 IGHV5-10-1A0A0J9YXX1 117 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 CXorf51AA0A1B0GTR3 108 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 TCP11X1B4DZS4 312 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 GOLGA8SH3BPF8 625 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 E2F3O00716 465 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 CASC3O15234 703 aaKnown RBP3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 B4GAT1O43505 415 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 STX10O60499 249 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 TRUB2O95900 331 aaKnown RBP3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 ECDO95905 644 aaPredicted RBP3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 CDH3P22223 829 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 IL10P22301 178 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 PRKACGP22612 351 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 CCR1P32246 355 aa3.98□□□□□ -1.77
HMGB3P5-201ENST00000428894 EVI2BP34910 448 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms