RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 POC1BQ8TC44 478 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 ACTRT2Q8TDY3 377 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 C18orf12Q96KH6 178 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 MARK4Q96L34 752 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 C3orf30Q96M34 536 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 STACQ99469 402 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 PIGUQ9H490 435 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 C12orf49Q9H741 205 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 CXorf36Q9H7Y0 433 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 PAQR5Q9NXK6 330 aaPredicted RBP15.29■□□□□ 0.04
TRIM39-209ENST00000428728 LGALS13Q9UHV8 139 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 NAV3Q8IVL0 2385 aa15.29■□□□□ 0.04
TRIM39-209ENST00000428728 OIP5O43482 229 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 NUDT17P0C025 328 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 IL11P20809 199 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 SOAT1P35610 550 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 CCT3P49368 545 aaKnown RBP15.28■□□□□ 0.04
TRIM39-209ENST00000428728 VSNL1P62760 191 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 ACKR1Q16570 336 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 DCST2Q5T1A1 773 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 CPTPQ5TA50 214 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 IL23RQ5VWK5 629 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 ESPNLQ6ZVH7 1005 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 BIVMQ86UB2 503 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 ZNF527Q8NB42 609 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 OR56A1Q8NGH5 318 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 OR5AK3PQ8NH89 298 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 ADAMTS15Q8TE58 950 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 OR5P2Q8WZ92 322 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 CAVIN3Q969G5 261 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 PIGTQ969N2 578 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 KLHL15Q96M94 604 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 ACTRT3Q9BYD9 372 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 ATAD3AQ9NVI7 634 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 ZDHHC2Q9UIJ5 367 aa15.28■□□□□ 0.04
TRIM39-209ENST00000428728 FAF1Q9UNN5 650 aaPredicted RBP15.28■□□□□ 0.04
TRIM39-209ENST00000428728 ADAMDEC1O15204 470 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 CFLARO15519 480 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 ARHGEF9O43307 516 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 HSPA4LO95757 839 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 THBDP07204 575 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 INHBBP09529 407 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 LINGO3P0C6S8 592 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 CREB1P16220 341 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 FPR1P21462 350 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 LOXP28300 417 aaPredicted RBP15.27■□□□□ 0.04
TRIM39-209ENST00000428728 AGTR1P30556 359 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 NDUFAF6Q330K2 333 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 C6orf136Q5SQH8 315 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 PDSS1Q5T2R2 415 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 CBLN3Q6UW01 205 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 STAC2Q6ZMT1 411 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 HOMEZQ8IX15 550 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 LILRA2Q8N149 483 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 TMCO5AQ8N6Q1 288 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 ROBO4Q8WZ75 1007 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 TUBGCP3Q96CW5 907 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 PERPQ96FX8 193 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 ZNF395Q9H8N7 513 aaPredicted RBP15.27■□□□□ 0.04
TRIM39-209ENST00000428728 PLSCR4Q9NRQ2 329 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 CARD8Q9Y2G2 431 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 KCNE3Q9Y6H6 103 aa15.27■□□□□ 0.04
TRIM39-209ENST00000428728 VPS13CQ709C8 3753 aa15.27■□□□□ 0.03
TRIM39-209ENST00000428728 ROS1P08922 2347 aa15.26■□□□□ 0.03
TRIM39-209ENST00000428728 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.26■□□□□ 0.03
TRIM39-209ENST00000428728 TUBBP07437 444 aa15.26■□□□□ 0.03
TRIM39-209ENST00000428728 KRT16P08779 473 aa15.26■□□□□ 0.03
TRIM39-209ENST00000428728 ELK4P28324 431 aa15.26■□□□□ 0.03
TRIM39-209ENST00000428728 ZNF239Q16600 458 aaKnown RBP15.26■□□□□ 0.03
TRIM39-209ENST00000428728 LSM12Q3MHD2 195 aaKnown RBP15.26■□□□□ 0.03
TRIM39-209ENST00000428728 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.26■□□□□ 0.03
TRIM39-209ENST00000428728 C20orf204Q6ZNR8 217 aa15.26■□□□□ 0.03
TRIM39-209ENST00000428728 MTERF4Q7Z6M4 381 aaKnown RBP15.26■□□□□ 0.03
TRIM39-209ENST00000428728 STK32CQ86UX6 486 aa15.26■□□□□ 0.03
TRIM39-209ENST00000428728 WFDC8Q8IUA0 241 aa15.26■□□□□ 0.03
TRIM39-209ENST00000428728 ATP6V1C2Q8NEY4 427 aa15.26■□□□□ 0.03
TRIM39-209ENST00000428728 OR5D16Q8NGK9 328 aa15.26■□□□□ 0.03
TRIM39-209ENST00000428728 RFWD2Q8NHY2 731 aa15.26■□□□□ 0.03
TRIM39-209ENST00000428728 SFXN5Q8TD22 340 aa15.26■□□□□ 0.03
TRIM39-209ENST00000428728 ABHD3Q8WU67 409 aa15.26■□□□□ 0.03
TRIM39-209ENST00000428728 OSTF1Q92882 214 aa15.26■□□□□ 0.03
TRIM39-209ENST00000428728 PIP5K1AQ99755 562 aa15.26■□□□□ 0.03
TRIM39-209ENST00000428728 SRXN1Q9BYN0 137 aa15.26■□□□□ 0.03
TRIM39-209ENST00000428728 GPATCH2Q9NW75 528 aa15.26■□□□□ 0.03
TRIM39-209ENST00000428728 H3BNH8 94 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 GTPBP1O00178 669 aaKnown RBP15.25■□□□□ 0.03
TRIM39-209ENST00000428728 LYPLA1O75608 230 aaPredicted RBP15.25■□□□□ 0.03
TRIM39-209ENST00000428728 SERPINB5P36952 375 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 EIF1P41567 113 aaKnown RBP15.25■□□□□ 0.03
TRIM39-209ENST00000428728 P2RX1P51575 399 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 CCR4P51679 360 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 CARD18P57730 90 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 RPS26P62854 115 aaKnown RBP15.25■□□□□ 0.03
TRIM39-209ENST00000428728 LTBQ06643 244 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 TOMM34Q15785 309 aaPredicted RBP15.25■□□□□ 0.03
TRIM39-209ENST00000428728 KLHL26Q53HC5 615 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 BEX5Q5H9J7 111 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 ALKBH2Q6NS38 261 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 CLEC9AQ6UXN8 241 aa15.25■□□□□ 0.03
TRIM39-209ENST00000428728 BEND4Q6ZU67 534 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms