RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 LRRC74BQ6ZQY2 392 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 PEX26Q7Z412 305 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 PPP1R42Q7Z4L9 355 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 SNX32Q86XE0 403 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 NELFCDQ8IXH7 590 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 ST13P4Q8IZP2 240 aaPredicted RBP2.63□□□□□ -1.99
LINC01040-201ENST00000425048 KIR2DL5AQ8N109 375 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 NECAB1Q8N987 351 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 TTLQ8NG68 377 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 DGCR14Q96DF8 476 aaKnown RBP2.63□□□□□ -1.99
LINC01040-201ENST00000425048 CCDC51Q96ER9 411 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 TSGA13Q96PP4 275 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 RAB3IPQ96QF0 476 aaPredicted RBP2.63□□□□□ -1.99
LINC01040-201ENST00000425048 MTMR9Q96QG7 549 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 TRPV6Q9H1D0 765 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 ZNF665Q9H7R5 613 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 DCLRE1BQ9H816 532 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 NEK6Q9HC98 313 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 HPS4Q9NQG7 708 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 FARSBQ9NSD9 589 aaKnown RBP2.63□□□□□ -1.99
LINC01040-201ENST00000425048 DPM3Q9P2X0 92 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 MTRF1LQ9UGC7 380 aaKnown RBP2.63□□□□□ -1.99
LINC01040-201ENST00000425048 VANGL2Q9ULK5 521 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 STK38LQ9Y2H1 464 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 IFT52Q9Y366 437 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 UTP11Q9Y3A2 253 aaKnown RBP2.63□□□□□ -1.99
LINC01040-201ENST00000425048 ETV7Q9Y603 341 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 SAR1BQ9Y6B6 198 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.63□□□□□ -1.99
LINC01040-201ENST00000425048 RAI1Q7Z5J4 1906 aaPredicted RBP2.63□□□□□ -1.99
LINC01040-201ENST00000425048 BCL9LQ86UU0 1499 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 ZMYM6O95789 1325 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 ATAD5Q96QE3 1844 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 KIF13BQ9NQT8 1826 aa2.63□□□□□ -1.99
LINC01040-201ENST00000425048 CLTCQ00610 1675 aaKnown RBP2.63□□□□□ -1.99
LINC01040-201ENST00000425048 UNC13BO14795 1591 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 CEP170BQ9Y4F5 1589 aaPredicted RBP2.62□□□□□ -1.99
LINC01040-201ENST00000425048 KIAA0556O60303 1618 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 MAP3K4Q9Y6R4 1608 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 IQANK1A0A1B0GTG1 560 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 PVALEFA0A1B0GWK0 134 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 CLRN2A0PK11 232 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 GTPBP10A4D1E9 387 aaKnown RBP2.62□□□□□ -1.99
LINC01040-201ENST00000425048 TRIM64A6NGJ6 449 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 TRIM64BA6NI03 449 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 ZSCAN5BA6NJL1 495 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 GOLGA8JA6NMD2 632 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 H7C0C1 242 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 K7EPI3 171 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 SLC9A3R1O14745 358 aaPredicted RBP2.62□□□□□ -1.99
LINC01040-201ENST00000425048 POLR1CO15160 346 aaPredicted RBP2.62□□□□□ -1.99
LINC01040-201ENST00000425048 SLC22A1O15245 554 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 KIAA0513O60268 411 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 CSDE1O75534 798 aaKnown RBP2.62□□□□□ -1.99
LINC01040-201ENST00000425048 SULT1C4O75897 302 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 PLEKHA8P1O95397 391 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 PSMG1O95456 288 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 ZFYP08048 801 aaPredicted RBP2.62□□□□□ -1.99
LINC01040-201ENST00000425048 SNRPAP09012 282 aaKnown RBP2.62□□□□□ -1.99
LINC01040-201ENST00000425048 CALM1P0DP23 149 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 CALM2P0DP24 149 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 CALM3P0DP25 149 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 CRABP2P29373 138 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 MARCKSP29966 332 aaPredicted RBP2.62□□□□□ -1.99
LINC01040-201ENST00000425048 HSPA1LP34931 641 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 OR3A1P47881 315 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 HSD17B7P56937 341 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 RPL26P61254 145 aaKnown RBP2.62□□□□□ -1.99
LINC01040-201ENST00000425048 ATP6V0D1P61421 351 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 SLC34A1Q06495 639 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 MRPL28Q13084 256 aaKnown RBP2.62□□□□□ -1.99
LINC01040-201ENST00000425048 DNAJC3Q13217 504 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 APOFQ13790 326 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 NFE2L1Q14494 772 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 KYAT1Q16773 422 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 CLVS2Q5SYC1 327 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 BEND3Q5T5X7 828 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 UGT2A3Q6UWM9 527 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 USP50Q70EL3 339 aaPredicted RBP2.62□□□□□ -1.99
LINC01040-201ENST00000425048 ADAMTSL2Q86TH1 951 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 CENPSQ8N2Z9 138 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 EIF1ADQ8N9N8 165 aaKnown RBP2.62□□□□□ -1.99
LINC01040-201ENST00000425048 OR10Z1Q8NGY1 313 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 PHOSPHO2Q8TCD6 241 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 HEXDCQ8WVB3 486 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 MRPS27Q92552 414 aaKnown RBP2.62□□□□□ -1.99
LINC01040-201ENST00000425048 IL22RA2Q969J5 263 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 RMDN1Q96DB5 314 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 CAPZA3Q96KX2 299 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 ZNF641Q96N77 438 aaPredicted RBP2.62□□□□□ -1.99
LINC01040-201ENST00000425048 BIRC8Q96P09 236 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 RPRD1AQ96P16 312 aaPredicted RBP2.62□□□□□ -1.99
LINC01040-201ENST00000425048 VPS35Q96QK1 796 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 THAP9Q9H5L6 903 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 ARMC7Q9H6L4 198 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 TMEM206Q9H813 350 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 NTN4Q9HB63 628 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 SLC38A10Q9HBR0 1119 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 FANCFQ9NPI8 374 aa2.62□□□□□ -1.99
LINC01040-201ENST00000425048 C8orf4Q9NR00 106 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms