RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 OR4D9Q8NGE8 314 aa13.35□□□□□ -0.27
MSH5-206ENST00000423982 UBE2E3Q969T4 207 aa13.35□□□□□ -0.27
MSH5-206ENST00000423982 SAMD8Q96LT4 415 aa13.35□□□□□ -0.27
MSH5-206ENST00000423982 BTBD1Q9H0C5 482 aa13.35□□□□□ -0.27
MSH5-206ENST00000423982 KLHL1Q9NR64 748 aa13.35□□□□□ -0.27
MSH5-206ENST00000423982 ZNF224Q9NZL3 707 aa13.35□□□□□ -0.27
MSH5-206ENST00000423982 SERGEFQ9UGK8 458 aa13.35□□□□□ -0.27
MSH5-206ENST00000423982 POLHQ9Y253 713 aa13.35□□□□□ -0.27
MSH5-206ENST00000423982 SCN3AQ9NY46 2000 aa13.35□□□□□ -0.27
MSH5-206ENST00000423982 C7orf66A4D0T2 115 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 RGS9O75916 674 aaPredicted RBP13.34□□□□□ -0.27
MSH5-206ENST00000423982 DHFRP00374 187 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 IGHA1P01876 353 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 TCRBP04435 133 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 TPOP07202 933 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 MRPL3P09001 348 aaKnown RBP13.34□□□□□ -0.27
MSH5-206ENST00000423982 ANKRD34CP0C6C1 535 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 HOXB3P14651 431 aaPredicted RBP13.34□□□□□ -0.27
MSH5-206ENST00000423982 TALDO1P37837 337 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 DGCR2P98153 550 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 SLC3A1Q07837 685 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 ST3GAL2Q16842 350 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 ZNF793Q6ZN11 406 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 Q6ZS52 159 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 RASSF6Q6ZTQ3 369 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 ADCK2Q7Z695 626 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 LRRC28Q86X40 367 aaPredicted RBP13.34□□□□□ -0.27
MSH5-206ENST00000423982 SIAH3Q8IW03 269 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 RPLP0P6Q8NHW5 317 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 ORAI3Q9BRQ5 295 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 C1QTNF7Q9BXJ2 289 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 KLHL31Q9H511 634 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 NT5DC2Q9H857 520 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 DIABLOQ9NR28 239 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 NLGN3Q9NZ94 848 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 MRPL15Q9P015 296 aaKnown RBP13.34□□□□□ -0.27
MSH5-206ENST00000423982 SCML1Q9UN30 329 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 IRGMA1A4Y4 181 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 SLC9B1P1A6NJY1 282 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 C4orf51C9J302 202 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 NDUFS4O43181 175 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 SPINT1O43278 529 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 FCMRO60667 390 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 MT-ND4P03905 459 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 PRNPP04156 253 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 ANXA3P12429 323 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 POLR2CP19387 275 aaPredicted RBP13.34□□□□□ -0.27
MSH5-206ENST00000423982 PTBP1P26599 531 aaKnown RBP eCLIP13.34□□□□□ -0.273e-8■■■□□ 16.6
MSH5-206ENST00000423982 CLCNKAP51800 687 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 TMEM196Q5HYL7 178 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 HBMQ6B0K9 141 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 FCRLBQ6BAA4 426 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 PRSS45Q7RTY3 260 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 OAFQ86UD1 273 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 IZUMO1Q8IYV9 350 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 MAFAQ8NHW3 353 aaPredicted RBP13.34□□□□□ -0.27
MSH5-206ENST00000423982 TRMT10AQ8TBZ6 339 aaKnown RBP13.34□□□□□ -0.27
MSH5-206ENST00000423982 DIO2Q92813 273 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 C12orf66Q96MD2 445 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 CD93Q9NPY3 652 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 NKIRAS2Q9NYR9 191 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 SLC23A2Q9UGH3 650 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 SCN2AQ99250 2005 aa13.34□□□□□ -0.27
MSH5-206ENST00000423982 A0A1W2PP55 124 aa13.33□□□□□ -0.27
MSH5-206ENST00000423982 ACVR1BP36896 505 aa13.33□□□□□ -0.27
MSH5-206ENST00000423982 MAPK9P45984 424 aa13.33□□□□□ -0.27
MSH5-206ENST00000423982 RPL6Q02878 288 aaKnown RBP13.33□□□□□ -0.27
MSH5-206ENST00000423982 ANGPT1Q15389 498 aa13.33□□□□□ -0.27
MSH5-206ENST00000423982 PGGHGQ32M88 737 aa13.33□□□□□ -0.27
MSH5-206ENST00000423982 TJAP1Q5JTD0 557 aa13.33□□□□□ -0.27
MSH5-206ENST00000423982 SFXN4Q6P4A7 337 aa13.33□□□□□ -0.27
MSH5-206ENST00000423982 NUDT13Q86X67 352 aa13.33□□□□□ -0.27
MSH5-206ENST00000423982 C17orf47Q8NEP4 570 aa13.33□□□□□ -0.27
MSH5-206ENST00000423982 KAT2AQ92830 837 aa13.33□□□□□ -0.27
MSH5-206ENST00000423982 RFKQ969G6 155 aa13.33□□□□□ -0.27
MSH5-206ENST00000423982 SORCS2Q96PQ0 1159 aa13.33□□□□□ -0.27
MSH5-206ENST00000423982 UBL7Q96S82 380 aaPredicted RBP13.33□□□□□ -0.27
MSH5-206ENST00000423982 ALG8Q9BVK2 526 aa13.33□□□□□ -0.27
MSH5-206ENST00000423982 ASB6Q9NWX5 421 aa13.33□□□□□ -0.27
MSH5-206ENST00000423982 TMEM5Q9Y2B1 443 aa13.33□□□□□ -0.27
MSH5-206ENST00000423982 EXOGQ9Y2C4 368 aaKnown RBP13.33□□□□□ -0.27
MSH5-206ENST00000423982 KNL1Q8NG31 2342 aa13.33□□□□□ -0.27
MSH5-206ENST00000423982 SYNDIG1LA6NDD5 238 aa13.33□□□□□ -0.28
MSH5-206ENST00000423982 CHST10O43529 356 aa13.33□□□□□ -0.28
MSH5-206ENST00000423982 SOX30O94993 753 aa13.33□□□□□ -0.28
MSH5-206ENST00000423982 ZIC2O95409 532 aaPredicted RBP13.33□□□□□ -0.28
MSH5-206ENST00000423982 HOXB2P14652 356 aa13.33□□□□□ -0.28
MSH5-206ENST00000423982 COL9A1P20849 921 aa13.33□□□□□ -0.28
MSH5-206ENST00000423982 KELP23276 732 aa13.33□□□□□ -0.28
MSH5-206ENST00000423982 GPR1P46091 355 aa13.33□□□□□ -0.28
MSH5-206ENST00000423982 SNTA1Q13424 505 aa13.33□□□□□ -0.28
MSH5-206ENST00000423982 LCTLQ6UWM7 567 aa13.33□□□□□ -0.28
MSH5-206ENST00000423982 FAM3CQ92520 227 aa13.33□□□□□ -0.28
MSH5-206ENST00000423982 GCDHQ92947 438 aaPredicted RBP13.33□□□□□ -0.28
MSH5-206ENST00000423982 DTD2Q96FN9 168 aa13.33□□□□□ -0.28
MSH5-206ENST00000423982 RBP7Q96R05 134 aa13.33□□□□□ -0.28
MSH5-206ENST00000423982 BBS4Q96RK4 519 aa13.33□□□□□ -0.28
MSH5-206ENST00000423982 SLC35C2Q9NQQ7 365 aa13.33□□□□□ -0.28
MSH5-206ENST00000423982 SNRNP200O75643 2136 aaKnown RBP13.33□□□□□ -0.28
MSH5-206ENST00000423982 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms