RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 GGNQ86UU5 652 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 RIMKLAQ8IXN7 391 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 GTPBP8Q8N3Z3 284 aaPredicted RBP8.34□□□□□ -1.07
NUP50-206ENST00000422489 METTL25Q8N6Q8 603 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 ANKRD42Q8N9B4 389 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 ZNF527Q8NB42 609 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 CHDHQ8NE62 594 aaPredicted RBP8.34□□□□□ -1.07
NUP50-206ENST00000422489 OR5D16Q8NGK9 328 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 OR4A15Q8NGL6 344 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 FBXO27Q8NI29 283 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 POC1BQ8TC44 478 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 ROBO4Q8WZ75 1007 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 ZBTB8AQ96BR9 441 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 PIK3IP1Q96FE7 263 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 REXO5Q96IC2 774 aaKnown RBP8.34□□□□□ -1.07
NUP50-206ENST00000422489 ZIM3Q96PE6 472 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 MED18Q9BUE0 208 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 C20orf27Q9GZN8 174 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 RNF122Q9H9V4 155 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 PNPOQ9NVS9 261 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 GPATCH2Q9NW75 528 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 ELOVL5Q9NYP7 299 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 ZNF226Q9NYT6 803 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 C6orf203Q9P0P8 240 aaPredicted RBP8.34□□□□□ -1.07
NUP50-206ENST00000422489 MCTS1Q9ULC4 181 aaKnown RBP8.34□□□□□ -1.07
NUP50-206ENST00000422489 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.34□□□□□ -1.07
NUP50-206ENST00000422489 EMC9Q9Y3B6 208 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 DTNAQ9Y4J8 743 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 PKDREJQ9NTG1 2253 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 DCHS2Q6V1P9 2916 aa8.34□□□□□ -1.07
NUP50-206ENST00000422489 CSMD1Q96PZ7 3565 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 POLQO75417 2590 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 RNF103-CHMP3A0A140T963 221 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 DUXAA6NLW8 204 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 ZNF195O14628 629 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 TM9SF1O15321 606 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 ZNF500O60304 480 aaPredicted RBP8.33□□□□□ -1.08
NUP50-206ENST00000422489 DIAPH2O60879 1101 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 SOX30O94993 753 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 CGAP01215 116 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 HRGP04196 525 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 CD8BP10966 210 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 FCGR2AP12318 317 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 EIF1P41567 113 aaKnown RBP8.33□□□□□ -1.08
NUP50-206ENST00000422489 P2RX1P51575 399 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 CCR4P51679 360 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 ZNF117Q03924 483 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 FOXF1Q12946 379 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 GPR68Q15743 365 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 PLPPR5Q32ZL2 321 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 TMEM176BQ3YBM2 270 aaPredicted RBP8.33□□□□□ -1.08
NUP50-206ENST00000422489 EXOSC6Q5RKV6 272 aaKnown RBP8.33□□□□□ -1.08
NUP50-206ENST00000422489 GTF2IRD2BQ6EKJ0 949 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 ALKBH2Q6NS38 261 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 CBLN3Q6UW01 205 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 PAMR1Q6UXH9 720 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 OLIG3Q7RTU3 272 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 CAMKMTQ7Z624 323 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 MTERF4Q7Z6M4 381 aaKnown RBP8.33□□□□□ -1.08
NUP50-206ENST00000422489 GTF2IRD2Q86UP8 949 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 ANKRD46Q86W74 232 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 TMCO5AQ8N6Q1 288 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 VPS37AQ8NEZ2 397 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 SFXN5Q8TD22 340 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 MGARPQ8TDB4 240 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 XAGE5Q8WWM1 108 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 PHF3Q92576 2039 aaKnown RBP8.33□□□□□ -1.08
NUP50-206ENST00000422489 RNF166Q96A37 237 aaPredicted RBP8.33□□□□□ -1.08
NUP50-206ENST00000422489 SLC35G5Q96KT7 338 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 KLHL15Q96M94 604 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 SDF2Q99470 211 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 NUF2Q9BZD4 464 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 PLEKHF2Q9H8W4 249 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 SSU72Q9NP77 194 aaKnown RBP8.33□□□□□ -1.08
NUP50-206ENST00000422489 TIGARQ9NQ88 270 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 PAQR5Q9NXK6 330 aaPredicted RBP8.33□□□□□ -1.08
NUP50-206ENST00000422489 MKLN1Q9UL63 735 aa8.33□□□□□ -1.08
NUP50-206ENST00000422489 HCFC1P51610 2035 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 PRSS51A0A1B0GVH4 220 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 ADAMDEC1O15204 470 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 ZNF264O43296 627 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 EFNA2O43921 213 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 FCMRO60667 390 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 STX11O75558 287 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 ATE1O95260 518 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 LINGO3P0C6S8 592 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 OR12D1P0DN82 309 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 LBPP18428 481 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 KLK2P20151 261 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 PSMA4P25789 261 aaKnown RBP8.32□□□□□ -1.08
NUP50-206ENST00000422489 SHC1P29353 583 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 S100A3P33764 101 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 UGT2B10P36537 528 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 OCRLQ01968 901 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 TOMM34Q15785 309 aaPredicted RBP8.32□□□□□ -1.08
NUP50-206ENST00000422489 SMU1Q2TAY7 513 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 DEFB113Q30KQ7 82 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.32□□□□□ -1.08
NUP50-206ENST00000422489 ANXA8L1Q5VT79 327 aa8.32□□□□□ -1.08
NUP50-206ENST00000422489 ESPNLQ6ZVH7 1005 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms