RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 OR6K3Q8NGY3 331 aa15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 OR2V1Q8NHB1 315 aa15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 POC1BQ8TC44 478 aa15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 NPAS1Q99742 590 aa15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 ASIC5Q9NY37 505 aa15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 NOP53Q9NZM5 478 aaKnown RBP15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 MTORP42345 2549 aa15.77■□□□□ 0.12
PDLIM2-208ENST00000416159 A0A0J9YW62 118 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 BIRC5O15392 142 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 RGS16O15492 202 aaPredicted RBP15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 SS18L1O75177 396 aaPredicted RBP15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 OPN1LWP04000 364 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 SERPINE1P05121 402 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 LINGO3P0C6S8 592 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 CD53P19397 219 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 CRYGSP22914 178 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 ADH6P28332 368 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 P2RX1P51575 399 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 ATP12AP54707 1039 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 SUMO3P55854 103 aaPredicted RBP15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 ADAM8P78325 824 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 KLHL26Q53HC5 615 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 HBMQ6B0K9 141 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 GTF2IRD2BQ6EKJ0 949 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 GTF2IRD2Q86UP8 949 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 NUDT8Q8WV74 236 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 OSTF1Q92882 214 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 SSU72Q9NP77 194 aaKnown RBP15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 FANCFQ9NPI8 374 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 BEX4Q9NWD9 120 aaPredicted RBP15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 C6orf203Q9P0P8 240 aaPredicted RBP15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 ACTL7BQ9Y614 415 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 KCNE3Q9Y6H6 103 aa15.76■□□□□ 0.11
PDLIM2-208ENST00000416159 NPIPA5A0A0B4J1W7 369 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 WDR91A4D1P6 747 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 DUXAA6NLW8 204 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 DEFB108AA8MXU0 73 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 NPIPA7E9PJI5 369 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 GTPBP1O00178 669 aaKnown RBP15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 TNFSF11O14788 317 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 ITM2AO43736 263 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 SNUPNO95149 360 aaKnown RBP15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 MYZAPP0CAP1 466 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 NPIPA8P0DM63 369 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 ELK4P28324 431 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 CARD18P57730 90 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 ABCE1P61221 599 aaKnown RBP15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 HBA1P69905 142 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 ZNF117Q03924 483 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 FOXD4Q12950 439 aaPredicted RBP15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 CHI3L2Q15782 390 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 PGS1Q32NB8 556 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 LILRA2Q8N149 483 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 PKNOX2Q96KN3 472 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 KLHL15Q96M94 604 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 OR7D2Q96RA2 312 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 KLHDC3Q9BQ90 382 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 KLHL4Q9C0H6 718 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 TMEM185BQ9H7F4 350 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 ICAM5Q9UMF0 924 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 CLEC4AQ9UMR7 237 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 RAP2CQ9Y3L5 183 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 DTNAQ9Y4J8 743 aa15.75■□□□□ 0.11
PDLIM2-208ENST00000416159 GJE1A6NN92 205 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 NPIPB9F8W1W9 429 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 TM9SF1O15321 606 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 SIAH2O43255 324 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 NUDT14O95848 222 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 PABPC4LP0CB38 370 aaKnown RBP15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 FOSL1P15407 271 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 PPP3CBP16298 524 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 MATN1P21941 496 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 CCKARP32238 428 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 SOAT1P35610 550 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 ZNF844Q08AG5 666 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 FOXF1Q12946 379 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 PDCD2Q16342 344 aaPredicted RBP15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 EXOC3L2Q2M3D2 409 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 ZNF550Q7Z398 422 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 KIRREL3Q8IZU9 778 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 ZNF781Q8N8C0 355 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 OR5AK3PQ8NH89 298 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 FBXO27Q8NI29 283 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 PIK3IP1Q96FE7 263 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 REXO5Q96IC2 774 aaKnown RBP15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 SDF2Q99470 211 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 PARD6BQ9BYG5 372 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 AKTIPQ9H8T0 292 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 TIGARQ9NQ88 270 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 PCDHGB4Q9UN71 923 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 CARD8Q9Y2G2 431 aa15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 GPC6Q9Y625 555 aaPredicted RBP15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 V9GYY5 206 aaPredicted RBP15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 HRNRQ86YZ3 2850 aaPredicted RBP15.74■□□□□ 0.11
PDLIM2-208ENST00000416159 ACANP16112 2415 aa15.73■□□□□ 0.11
PDLIM2-208ENST00000416159 RNASET2O00584 256 aaKnown RBP15.73■□□□□ 0.11
PDLIM2-208ENST00000416159 ZNF195O14628 629 aa15.73■□□□□ 0.11
PDLIM2-208ENST00000416159 EIF4E2O60573 245 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms