RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 KIAA0513O60268 411 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 UGT2B17O75795 530 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 H6PDO95479 791 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 CLDN1O95832 211 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 CSTAP01040 98 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 ZNF708P17019 499 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 ADH6P28332 368 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 ADH7P40394 386 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 STARP49675 285 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 LHX2P50458 406 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 CCR4P51679 360 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 ZNF117Q03924 483 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 MAPRE2Q15555 327 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 CD226Q15762 336 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 SGCBQ16585 318 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 SP5Q6BEB4 398 aaPredicted RBP13.31□□□□□ -0.28
CHD1-202ENST00000414220 NCCRP1Q6ZVX7 275 aaPredicted RBP13.31□□□□□ -0.28
CHD1-202ENST00000414220 P4HA3Q7Z4N8 544 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 FUNDC1Q8IVP5 155 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 CMIPQ8IY22 773 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 PEX5LQ8IYB4 626 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 MARVELD2Q8N4S9 558 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 LILRB4Q8NHJ6 448 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 TMEM234Q8WY98 164 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 ZFP3Q96NJ6 502 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 LAT2Q9GZY6 243 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 MED17Q9NVC6 651 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 ZNF337Q9Y3M9 751 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 PCDHB14Q9Y5E9 798 aa13.31□□□□□ -0.28
CHD1-202ENST00000414220 GPC6Q9Y625 555 aaPredicted RBP13.31□□□□□ -0.28
CHD1-202ENST00000414220 RELNP78509 3460 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 NUP214P35658 2090 aaPredicted RBP13.3□□□□□ -0.28
CHD1-202ENST00000414220 FLNCQ14315 2725 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 DNAJC13O75165 2243 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 DIDO1Q9BTC0 2240 aaKnown RBP13.3□□□□□ -0.28
CHD1-202ENST00000414220 C7orf72A4D263 438 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 DBIP07108 87 aaKnown RBP13.3□□□□□ -0.28
CHD1-202ENST00000414220 SNRPB2P08579 225 aaKnown RBP13.3□□□□□ -0.28
CHD1-202ENST00000414220 UQCRBP14927 111 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 IL7RP16871 459 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 PGCP20142 388 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 CHRNEQ04844 493 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 SYPL1Q16563 259 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 ZSWIM7Q19AV6 140 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 DCST1Q5T197 706 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.3□□□□□ -0.28
CHD1-202ENST00000414220 LRIF1Q5T3J3 769 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 AP1ARQ63HQ0 302 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 ARSKQ6UWY0 536 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 GRAMD2AQ8IUY3 354 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 CCDC71Q8IV32 467 aaPredicted RBP13.3□□□□□ -0.28
CHD1-202ENST00000414220 UBQLNLQ8IYU4 475 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 GTPBP8Q8N3Z3 284 aaPredicted RBP13.3□□□□□ -0.28
CHD1-202ENST00000414220 RPRMLQ8N4K4 120 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 OR5W2Q8NH69 310 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 SMPDL3BQ92485 455 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 WNT2BQ93097 391 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 PAIP1Q9H074 479 aaKnown RBP13.3□□□□□ -0.28
CHD1-202ENST00000414220 KLHL14Q9P2G3 628 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 ZNF629Q9UEG4 869 aaPredicted RBP13.3□□□□□ -0.28
CHD1-202ENST00000414220 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.3□□□□□ -0.28
CHD1-202ENST00000414220 ZNF232Q9UNY5 417 aa13.3□□□□□ -0.28
CHD1-202ENST00000414220 DOPEY2Q9Y3R5 2298 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 A0A0G2JNJ9 132 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 CLCA1A8K7I4 914 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 C17orf51A8MQB3 221 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 DYNC1I1O14576 645 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 SEC14L5O43304 696 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 TNFRSF21O75509 655 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 ETFAP13804 333 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 ELK4P28324 431 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 ADSLP30566 484 aaPredicted RBP13.29□□□□□ -0.28
CHD1-202ENST00000414220 OPRM1P35372 400 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 SLC6A8P48029 635 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 CLDN18P56856 261 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 B3GALT5-AS1P59052 145 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 RAC1P63000 192 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 KCNJ10P78508 379 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 FGFBP1Q14512 234 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 RGNQ15493 299 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 PLPPR5Q32ZL2 321 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 SLC25A35Q3KQZ1 300 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 MMEL1Q495T6 779 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 COX20Q5RI15 118 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 OR2A2Q6IF42 318 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 FRRS1Q6ZNA5 592 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 METTL25Q8N6Q8 603 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 ANKFN1Q8N957 763 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 OR5M1Q8NGP8 315 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 ZNF563Q8TA94 476 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 WDR60Q8WVS4 1066 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 ARSGQ96EG1 525 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 MRGPRX4Q96LA9 322 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 UCN2Q96RP3 112 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 TUBA1CQ9BQE3 449 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 THUMPD3Q9BV44 507 aaKnown RBP13.29□□□□□ -0.28
CHD1-202ENST00000414220 PRRG4Q9BZD6 226 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 NSRP1Q9H0G5 558 aaKnown RBP13.29□□□□□ -0.28
CHD1-202ENST00000414220 TIGARQ9NQ88 270 aa13.29□□□□□ -0.28
CHD1-202ENST00000414220 SERINC1Q9NRX5 453 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms