RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 CENPBD1B2RD01 187 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 PCGF3Q3KNV8 242 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 OR5D14Q8NGL3 314 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 TRAPPC2LQ9UL33 140 aa10.6□□□□□ -0.71
PRPF40A-202ENST00000410080 FOXN2P32314 431 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 GSK3BP49841 420 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 PGGT1BP53609 377 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 CREB3L2Q70SY1 520 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 SMG8Q8ND04 991 aaKnown RBP10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 ZDHHC16Q969W1 377 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 ADOQ96SZ5 270 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 UNKLQ9H9P5 680 aaKnown RBP10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 ASF1BQ9NVP2 202 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 GABRR3A8MPY1 467 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 AQP7O14520 342 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 RAB6AP20340 208 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 RPL23AP62750 156 aaKnown RBP10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 CNPY1Q3B7I2 92 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 PTCRAQ6ISU1 281 aaPredicted RBP10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 TUBA3EQ6PEY2 450 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 TMEM150AQ86TG1 271 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 SLC35F2Q8IXU6 374 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 PKP2Q99959 881 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 RTP3Q9BQQ7 232 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 GFOD1Q9NXC2 390 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 PHRF1Q9P1Y6 1649 aaKnown RBP10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 BET1O15155 118 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 CD63P08962 238 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 HTR5AP47898 357 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 GLO1Q04760 184 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 PDLIM3Q53GG5 364 aaPredicted RBP10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 TSPAN33Q86UF1 283 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 STEAP2Q8NFT2 490 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 ZFYVE21Q9BQ24 234 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 SAMD10Q9BYL1 202 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 ACTR3BQ9P1U1 418 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 SCML1Q9UN30 329 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 PRAMEF27A3QJZ7 478 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 A8MVM7 634 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 SCRG1O75711 98 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 DCNP07585 359 aaKnown RBP10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 ETFAP13804 333 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 HTR2AP28223 471 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 RABL3Q5HYI8 236 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 PRAMEF9Q5VWM5 478 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 PIGWQ7Z7B1 504 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 PLEKHO2Q8TD55 490 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 PINK1Q9BXM7 581 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 CD320Q9NPF0 282 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 ANKMY1Q9P2S6 941 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 G3V3Y1 287 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 UGDHO60701 494 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 SPINT3P49223 89 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 VASNQ6EMK4 673 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 SBSNQ6UWP8 590 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 MARVELD2Q8N4S9 558 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 ANKRD31Q8N7Z5 1873 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 NSUN5Q96P11 429 aaKnown RBP10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 LMF2Q9BU23 707 aaKnown RBP10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 DPH1Q9BZG8 443 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 NFYBP25208 207 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 CD70P32970 193 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 KIR2DL3P43628 341 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 EDDM3BP56851 147 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 GPR50Q13585 617 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 LRR1Q96L50 414 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 TP63Q9H3D4 680 aaPredicted RBP10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 TNFRSF19Q9NS68 423 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 CASP8AP2Q9UKL3 1982 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 SLX4Q8IY92 1834 aa10.59□□□□□ -0.71
PRPF40A-202ENST00000410080 C17orf113A0A1B0GUU1 675 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 NKX6-3A6NJ46 265 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 NPC1O15118 1278 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 SCAMP2O15127 329 aaKnown RBP10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 SEC14L2O76054 403 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 GRPP07492 148 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 OR5AR1Q8NGP9 310 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 DHRS9Q9BPW9 319 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 OR52A4PA6NMU1 304 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 SC5DO75845 299 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 PIGRP01833 764 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 STSP08842 583 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 ICAM2P13598 275 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 CD38P28907 300 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 PTGER1P34995 402 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 RPL26P61254 145 aaKnown RBP10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 PAFAH1B3Q15102 231 aaKnown RBP10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 MEDAGQ5VYS4 303 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 NIPAL3Q6P499 406 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 IL34Q6ZMJ4 242 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 TECPR1Q7Z6L1 1165 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 OR4A16Q8NH70 328 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 MOCOSQ96EN8 888 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 HHIPL1Q96JK4 782 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 FER1L6-AS2Q96M78 137 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 MICU1Q9BPX6 476 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 SIDT1Q9NXL6 827 aaKnown RBP10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 RPL26L1Q9UNX3 145 aaKnown RBP10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 SLC22A31A6NKX4 558 aa10.58□□□□□ -0.72
PRPF40A-202ENST00000410080 STC2O76061 302 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms