RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 MLF2Q15773 248 aaPredicted RBP7.92□□□□□ -1.14
SCN9A-203ENST00000409672 RAB6CQ53S08 254 aa7.92□□□□□ -1.14
SCN9A-203ENST00000409672 OR52E8Q6IFG1 317 aa7.92□□□□□ -1.14
SCN9A-203ENST00000409672 CMTM1Q8IZ96 169 aa7.92□□□□□ -1.14
SCN9A-203ENST00000409672 OR11L1Q8NGX0 322 aa7.92□□□□□ -1.14
SCN9A-203ENST00000409672 CHTF18Q8WVB6 975 aa7.92□□□□□ -1.14
SCN9A-203ENST00000409672 RAB6CQ9H0N0 254 aa7.92□□□□□ -1.14
SCN9A-203ENST00000409672 CUTCQ9NTM9 273 aa7.92□□□□□ -1.14
SCN9A-203ENST00000409672 EMC3Q9P0I2 261 aa7.92□□□□□ -1.14
SCN9A-203ENST00000409672 STUB1Q9UNE7 303 aa7.92□□□□□ -1.14
SCN9A-203ENST00000409672 PRAMEF27A3QJZ7 478 aa7.92□□□□□ -1.14
SCN9A-203ENST00000409672 SSR4P51571 173 aa7.92□□□□□ -1.14
SCN9A-203ENST00000409672 HTD2P86397 168 aa7.92□□□□□ -1.14
SCN9A-203ENST00000409672 KCNJ11Q14654 390 aa7.92□□□□□ -1.14
SCN9A-203ENST00000409672 ZNF791Q3KP31 576 aaPredicted RBP7.92□□□□□ -1.14
SCN9A-203ENST00000409672 PRAMEF9Q5VWM5 478 aa7.92□□□□□ -1.14
SCN9A-203ENST00000409672 AGBL5Q8NDL9 886 aa7.92□□□□□ -1.14
SCN9A-203ENST00000409672 POP5Q969H6 163 aaKnown RBP7.92□□□□□ -1.14
SCN9A-203ENST00000409672 EDARQ9UNE0 448 aa7.92□□□□□ -1.14
SCN9A-203ENST00000409672 HLA-DPB1P04440 258 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 PIK3CBP42338 1070 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 DCDP81605 110 aaKnown RBP7.91□□□□□ -1.14
SCN9A-203ENST00000409672 PNCKQ6P2M8 343 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 FAM185AQ8N0U4 392 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 CCL26Q9Y258 94 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 KIF13AQ9H1H9 1805 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 PIRO00625 290 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 HLA-FP30511 346 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 EFNA3P52797 238 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 IKZF1Q13422 519 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 SERINC5Q86VE9 423 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 TMEM173Q86WV6 379 aaPredicted RBP7.91□□□□□ -1.14
SCN9A-203ENST00000409672 OR9Q2Q8NGE9 314 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 ZBED3Q96IU2 234 aaPredicted RBP7.91□□□□□ -1.14
SCN9A-203ENST00000409672 OCEL1Q9H607 264 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 SIX4Q9UIU6 781 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 TRAV18A0A075B6X5 111 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 FOXD2O60548 495 aaPredicted RBP7.91□□□□□ -1.14
SCN9A-203ENST00000409672 CDKN2CP42773 168 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 RRADP55042 308 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 SPOCK1Q08629 439 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 UGT3A2Q3SY77 523 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 GSG1LQ6UXU4 331 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 MMP21Q8N119 569 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 DCUN1D4Q92564 292 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 NELL2Q99435 816 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 COL14A1Q05707 1796 aaKnown RBP7.91□□□□□ -1.14
SCN9A-203ENST00000409672 PRLP01236 227 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 FOXN2P32314 431 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 CARD18P57730 90 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 SLC35A2P78381 396 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 GALNT2Q10471 571 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 PLIN4Q96Q06 1357 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 IGHV3-15A0A0B4J1V0 119 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 MAGEA6P43360 314 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 PAFAH1B3Q15102 231 aaKnown RBP7.91□□□□□ -1.14
SCN9A-203ENST00000409672 NANOGP8Q6NSW7 305 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 MRPL41Q8IXM3 137 aaKnown RBP7.91□□□□□ -1.14
SCN9A-203ENST00000409672 SLC35F2Q8IXU6 374 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 METTL4Q8N3J2 472 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 MRPL43Q8N983 215 aaKnown RBP7.91□□□□□ -1.14
SCN9A-203ENST00000409672 MALSU1Q96EH3 234 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 PBX4Q9BYU1 374 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 SIDT1Q9NXL6 827 aaKnown RBP7.91□□□□□ -1.14
SCN9A-203ENST00000409672 PUS1Q9Y606 427 aaKnown RBP eCLIP7.91□□□□□ -1.14
SCN9A-203ENST00000409672 ASXL3Q9C0F0 2248 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 GFRA2O00451 464 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 SCAMP2O15127 329 aaKnown RBP7.91□□□□□ -1.14
SCN9A-203ENST00000409672 BCAS2O75934 225 aaPredicted RBP7.91□□□□□ -1.14
SCN9A-203ENST00000409672 CAPN3P20807 821 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 POU3F1Q03052 451 aaPredicted RBP7.91□□□□□ -1.14
SCN9A-203ENST00000409672 VWA2Q5GFL6 755 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 IL34Q6ZMJ4 242 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 SMIM15Q7Z3B0 74 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 TDHQ8IZJ6 230 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 HS3ST5Q8IZT8 346 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 SUN5Q8TC36 379 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 FCGR1BQ92637 280 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 SMIM14Q96QK8 99 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 SLC30A2Q9BRI3 323 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 FAM90A27PA6NNH2 459 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 ATXN7O15265 892 aaPredicted RBP7.91□□□□□ -1.14
SCN9A-203ENST00000409672 TAS2R43P59537 309 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 SLC46A2Q9BY10 475 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 RNF6Q9Y252 685 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 A0A1W2PP18 115 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 CD300LBA8K4G0 201 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 WASH4PA8MWX3 477 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 TSPAN15O95858 294 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 TFPTP0C1Z6 253 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 PCGF3Q3KNV8 242 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.91□□□□□ -1.14
SCN9A-203ENST00000409672 PXKQ7Z7A4 578 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 ST7LQ8TDW4 575 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 TMEM19Q96HH6 336 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 SLC29A3Q9BZD2 475 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 AGPAT4Q9NRZ5 378 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 DNMT3BQ9UBC3 853 aaKnown RBP7.91□□□□□ -1.14
SCN9A-203ENST00000409672 HSPB11Q9Y547 144 aa7.91□□□□□ -1.14
SCN9A-203ENST00000409672 GABRR3A8MPY1 467 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms