RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 ATRXP46100 2492 aa12.87□□□□□ -0.35
CHRNA1-204ENST00000409323 TRAV17A0A0B4J275 112 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 ACOT8O14734 319 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 DPM1O60762 260 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 RFPL3SP0C7P2 107 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 UBL4AP11441 157 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 PRG2P13727 222 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 CLK3P49761 638 aaKnown RBP12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 RBM45Q8IUH3 476 aaKnown RBP12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 OR4D11Q8NGI4 311 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 RNF138Q8WVD3 245 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 ZNF524Q96C55 264 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 DSN1Q9H410 356 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 CTPS2Q9NRF8 586 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 ZNF232Q9UNY5 417 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 LHX6Q9UPM6 363 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 B3GNT3Q9Y2A9 372 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 KLF13Q9Y2Y9 288 aaPredicted RBP12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 SH3GLB1Q9Y371 365 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 LRRC3CA6NJW4 275 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 SHISA8B8ZZ34 492 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 AP3D1O14617 1153 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 WISP2O76076 250 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 WISP1O95388 367 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 NUDT14O95848 222 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 MT-ND1P03886 318 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 FESP07332 822 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 NGFRP08138 427 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 LCN1P31025 176 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 KCNJ5P48544 419 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 PLGLB1Q02325 96 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 FLOT2Q14254 428 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 TOMM20Q15388 145 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 FXNQ16595 210 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 C1orf146Q5VVC0 180 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 SLC30A6Q6NXT4 461 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 Q6ZS92 163 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 FKBP9P1Q75LS8 142 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 EIF3MQ7L2H7 374 aaKnown RBP12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 PACS2Q86VP3 889 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 TMEM178AQ8NBL3 297 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 OR1J4Q8NGS1 313 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 HSH2DQ96JZ2 352 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 SECISBP2Q96T21 854 aaKnown RBP12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 NPAS1Q99742 590 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 FAM173AQ9BQD7 235 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 SPATA5L1Q9BVQ7 753 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 ADNPQ9H2P0 1102 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 DENND2DQ9H6A0 471 aaPredicted RBP12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 DNAJB12Q9NXW2 375 aaKnown RBP12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 ACTR3BQ9P1U1 418 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 IFT52Q9Y366 437 aa12.86□□□□□ -0.35
CHRNA1-204ENST00000409323 ITPR1Q14643 2758 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 NBEAQ8NFP9 2946 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 A0A1W2PQD3 144 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 CDHR4A6H8M9 788 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 H3BNH8 94 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 ERVH48-1M5A8F1 160 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 ZNF264O43296 627 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 SUV39H1O43463 412 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 TRIM3O75382 744 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 PRKD3O94806 890 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 THBS1P07996 1170 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 GUSBP08236 651 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 YAP1P46937 504 aaKnown RBP12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 FOXK1P85037 733 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 FOXO1Q12778 655 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 SKP2Q13309 424 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 TOMM34Q15785 309 aaPredicted RBP12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 SPATS1Q496A3 300 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 RNFT1Q5M7Z0 435 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 ARSKQ6UWY0 536 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 CBLL1Q75N03 491 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 SPATA24Q86W54 205 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 OR4K17Q8NGC6 315 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 OR5M1Q8NGP8 315 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 ZNF597Q96LX8 424 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 LRGUKQ96M69 825 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 SEPHS2Q99611 448 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 PINK1Q9BXM7 581 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 TTTY12Q9BZ98 90 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 SLC25A18Q9H1K4 315 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 GORASP2Q9H8Y8 452 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 DCAF13Q9NV06 445 aaKnown RBP12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 ADPRHL2Q9NX46 363 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 VDAC3Q9Y277 283 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 PCDHGB7Q9Y5F8 929 aa12.85□□□□□ -0.35
CHRNA1-204ENST00000409323 TCRBV5S2A0A599 114 aa12.84□□□□□ -0.35
CHRNA1-204ENST00000409323 KLRC4-KLRK1H3BQV0 150 aa12.84□□□□□ -0.35
CHRNA1-204ENST00000409323 SNPHO15079 494 aa12.84□□□□□ -0.35
CHRNA1-204ENST00000409323 CELA3AP09093 270 aa12.84□□□□□ -0.35
CHRNA1-204ENST00000409323 PRKAR1BP31321 381 aa12.84□□□□□ -0.35
CHRNA1-204ENST00000409323 SELENOWP63302 87 aa12.84□□□□□ -0.35
CHRNA1-204ENST00000409323 C17orf67Q0P5P2 114 aa12.84□□□□□ -0.35
CHRNA1-204ENST00000409323 SNTA1Q13424 505 aa12.84□□□□□ -0.35
CHRNA1-204ENST00000409323 PRR30Q53SZ7 412 aaPredicted RBP12.84□□□□□ -0.35
CHRNA1-204ENST00000409323 AP1ARQ63HQ0 302 aa12.84□□□□□ -0.35
CHRNA1-204ENST00000409323 LCN8Q6JVE9 175 aa12.84□□□□□ -0.35
CHRNA1-204ENST00000409323 DHRS4L2Q6PKH6 230 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms