RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 GAAP10253 952 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 C6P13671 934 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 GSTM3P21266 225 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 TSPAN5P62079 268 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 ZNF750Q32MQ0 723 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 PABPC1L2AQ5JQF8 200 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 FAM209BQ5JX69 171 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 UBE3DQ7Z6J8 389 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 ACOT12Q8WYK0 555 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 NOTCH4Q99466 2003 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 G3V3Q6 166 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 GABRPO00591 440 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 SSNA1O43805 119 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 SELENOFO60613 162 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 ERAL1O75616 437 aaKnown RBP14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 SNAPC5O75971 98 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 GNSP15586 552 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 CCR8P51685 355 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 RAG2P55895 527 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 ST3GAL2Q16842 350 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 GSG1Q2KHT4 349 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 ATRAIDQ6UW56 229 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 DCUN1D3Q8IWE4 304 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 LINC00471Q8N535 108 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 MOSPD2Q8NHP6 518 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 RGMAQ96B86 450 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 MACROD1Q9BQ69 325 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 TM7SF3Q9NS93 570 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 ACSS1Q9NUB1 689 aaPredicted RBP14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 SLC23A2Q9UGH3 650 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 KCNK7Q9Y2U2 307 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 KCNE3Q9Y6H6 103 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 LRRK1Q38SD2 2015 aa14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 TCF20Q9UGU0 1960 aaKnown RBP14.9□□□□□ -0.02
CHMP1A-201ENST00000397901 NUP210Q8TEM1 1887 aaPredicted RBP14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 KDM4EB2RXH2 506 aaPredicted RBP14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 SULT1B1O43704 296 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 TOXO94900 526 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 DDX6P26196 483 aaKnown RBP eCLIP14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 TRIM23P36406 574 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 SSR2P43308 183 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 KHKP50053 298 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 PLPP4Q5VZY2 271 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 NLRC3Q7RTR2 1065 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 EIF4E3Q8N5X7 224 aaKnown RBP14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 ARIH2OSQ8N7S6 290 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 ZNF485Q8NCK3 441 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 BBS1Q8NFJ9 593 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 BBS10Q8TAM1 723 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 CHFRQ96EP1 664 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 C16orf58Q96GQ5 468 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 BBS4Q96RK4 519 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 RNF32Q9H0A6 362 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 IMP3Q9NV31 184 aaKnown RBP14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 ACTR10Q9NZ32 417 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 GPR55Q9Y2T6 319 aaPredicted RBP14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 LCMT2O60294 686 aaKnown RBP14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 FGBP02675 491 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 TFPIP10646 304 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 ACP5P13686 325 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 UGT2B7P16662 529 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 MEOX2P50222 304 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 RPS7P62081 194 aaKnown RBP14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 ZNF155Q12901 538 aaPredicted RBP14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 KRT74Q7RTS7 529 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 MRPL43Q8N983 215 aaKnown RBP14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 C7orf57Q8NEG2 295 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 GNPDA2Q8TDQ7 276 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 SPRYD4Q8WW59 207 aaPredicted RBP14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 ASB12Q8WXK4 309 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 HSD17B8Q92506 261 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 ARRDC3Q96B67 414 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 MS4A3Q96HJ5 214 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 SPATA5L1Q9BVQ7 753 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 CYSLTR2Q9NS75 346 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 SEMA4GQ9NTN9 838 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 ING1Q9UK53 422 aaPredicted RBP14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 NTNG1Q9Y2I2 539 aa14.89□□□□□ -0.03
CHMP1A-201ENST00000397901 C17orf113A0A1B0GUU1 675 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 TCRBV16S1A1N1A0A5B0 115 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 PQLC2LA1A4F0 135 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 H7C2Y5 167 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 HLA-DPB1P04440 258 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 HMGN2P05204 90 aaKnown RBP14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 ADRB1P08588 477 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 C8orf89P0DMQ9 161 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 ATP6V1E1P36543 226 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 REEP5Q00765 189 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 PIP5KL1Q5T9C9 394 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 KLBQ86Z14 1044 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 OR4Q3Q8NH05 313 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 ZG16BQ96DA0 208 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 LRIG1Q96JA1 1093 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 ART5Q96L15 291 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 LINC00615Q96LM1 132 aaPredicted RBP14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 SARGQ9BW04 601 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 METTL17Q9H7H0 456 aaPredicted RBP14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 PELI2Q9HAT8 420 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 EQTNQ9NQ60 294 aa14.88□□□□□ -0.03
CHMP1A-201ENST00000397901 CHD7Q9P2D1 2997 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms