RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 GSTM5P46439 218 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 PDLIM4P50479 330 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 RAE1P78406 368 aaKnown RBP8.31□□□□□ -1.08
NEDD9-203ENST00000397378 PPA1Q15181 289 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 ZNHIT3Q15649 155 aaPredicted RBP8.31□□□□□ -1.08
NEDD9-203ENST00000397378 CARTPTQ16568 116 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 GRAMD1BQ3KR37 738 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 TIMM23BQ5SRD1 257 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 GALNT18Q6P9A2 607 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 Q6ZSR9 355 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 P2RY8Q86VZ1 359 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 FBXL14Q8N1E6 418 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 OR2L13Q8N349 312 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 FBF1Q8TES7 1133 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 C16orf78Q8WTQ4 265 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 SLC9A6Q92581 669 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 MRPL24Q96A35 216 aaKnown RBP8.31□□□□□ -1.08
NEDD9-203ENST00000397378 MUCL1Q96DR8 90 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 DHRS9Q9BPW9 319 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 SOX7Q9BT81 388 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 C3orf14Q9HBI5 128 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 TIGARQ9NQ88 270 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 MED17Q9NVC6 651 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 ZNF225Q9UK10 706 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 POU2F3Q9UKI9 436 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 MGAT4BQ9UQ53 548 aa8.31□□□□□ -1.08
NEDD9-203ENST00000397378 NUP214P35658 2090 aaPredicted RBP8.31□□□□□ -1.08
NEDD9-203ENST00000397378 GNG14A0A1W2PPG7 69 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 VWC2LB2RUY7 222 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 PPP6CO00743 305 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 NDUFB5O43674 189 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 SMIM24O75264 130 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 PRKD3O94806 890 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 KCNH1O95259 989 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 PGM3O95394 542 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 NTN1O95631 604 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 OXSR1O95747 527 aaPredicted RBP8.3□□□□□ -1.08
NEDD9-203ENST00000397378 IGKV1D-16P01601 117 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 KRT6AP02538 564 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 KRT6BP04259 564 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 JUNP05412 331 aaKnown RBP8.3□□□□□ -1.08
NEDD9-203ENST00000397378 YES1P07947 543 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 ELK4P28324 431 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 TYK2P29597 1187 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 KRT6CP48668 564 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 SERPINB8P50452 374 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 ZNF41P51814 821 aaPredicted RBP8.3□□□□□ -1.08
NEDD9-203ENST00000397378 EFNA4P52798 201 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 MANFP55145 182 aaKnown RBP8.3□□□□□ -1.08
NEDD9-203ENST00000397378 SLC18A2Q05940 514 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 SPIN4Q56A73 249 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 TMEM107Q6UX40 140 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 RPS27LQ71UM5 84 aaKnown RBP8.3□□□□□ -1.08
NEDD9-203ENST00000397378 LILRA2Q8N149 483 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 SLC43A2Q8N370 569 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 MUC15Q8N387 334 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 POC1BQ8TC44 478 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 ZNF483Q8TF39 744 aaPredicted RBP8.3□□□□□ -1.08
NEDD9-203ENST00000397378 HOXB13Q92826 284 aaPredicted RBP8.3□□□□□ -1.08
NEDD9-203ENST00000397378 ELP4Q96EB1 424 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 ERP44Q9BS26 406 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 C1QTNF3Q9BXJ4 246 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 SRXN1Q9BYN0 137 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 TMEM185BQ9H7F4 350 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 BCO1Q9HAY6 547 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 DDX18Q9NVP1 670 aaKnown RBP8.3□□□□□ -1.08
NEDD9-203ENST00000397378 SIRT5Q9NXA8 310 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 TAS2R7Q9NYW3 318 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 NPAP1Q9NZP6 1156 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 DMGDHQ9UI17 866 aaKnown RBP8.3□□□□□ -1.08
NEDD9-203ENST00000397378 PRDM4Q9UKN5 801 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 GRID1Q9ULK0 1009 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 PCDHB10Q9UN67 800 aa8.3□□□□□ -1.08
NEDD9-203ENST00000397378 VWFP04275 2813 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 GXYLT2A0PJZ3 443 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 FAM187AA6NFU0 413 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 E7EQL1 145 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 NDUFS8O00217 210 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 MANBAO00462 879 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 LYZL6O75951 148 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 OR4F21O95013 312 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 LINGO3P0C6S8 592 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 CHN1P15882 459 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 ZNF23P17027 643 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 COX5AP20674 150 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 DDCP20711 480 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 SHC1P29353 583 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 TIA1P31483 386 aaKnown RBP eCLIP8.29□□□□□ -1.08
NEDD9-203ENST00000397378 GABRA3P34903 492 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 SFTPDP35247 375 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 MAP3K8P41279 467 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 EIF1P41567 113 aaKnown RBP8.29□□□□□ -1.08
NEDD9-203ENST00000397378 MAGEA4P43358 317 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 OR3A2P47893 321 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 RFX3P48380 749 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 NCBP2P52298 156 aaKnown RBP eCLIP8.29□□□□□ -1.08
NEDD9-203ENST00000397378 CDH13P55290 713 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 ACSM2AQ08AH3 577 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 SCGB2A2Q13296 93 aa8.29□□□□□ -1.08
NEDD9-203ENST00000397378 SLC29A2Q14542 456 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms