RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 COQ10BQ9H8M1 238 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 PRM3Q9NNZ6 103 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 MYNNQ9NPC7 610 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 MED17Q9NVC6 651 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 ZNF446Q9NWS9 450 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 NUDT4Q9NZJ9 180 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 NFU1Q9UMS0 254 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 USP22Q9UPT9 525 aa11.95□□□□□ -0.5
VCPKMT-201ENST00000395859 B4DSR2 109 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 RGS14O43566 566 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 SEC31AO94979 1220 aaKnown RBP11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 IL33O95760 270 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 MTHFD2P13995 350 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 PGCP20142 388 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 TRIP10Q15642 601 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 CPSF6Q16630 551 aaKnown RBP eCLIP11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 TUSC1Q2TAM9 212 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 FBLN7Q53RD9 439 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 CCNYL2Q5T2Q4 361 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 PDSS1Q5T2R2 415 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 UGT2A3Q6UWM9 527 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 LRIG3Q6UXM1 1119 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 TRMT10CQ7L0Y3 403 aaKnown RBP11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 ISCA2Q86U28 154 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 OR7G2Q8NG99 324 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 OR9A2Q8NGT5 310 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 OR52N5Q8NH56 324 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 ACTRT2Q8TDY3 377 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 SNX18Q96RF0 628 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 MRPL1Q9BYD6 325 aaKnown RBP11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 CAB39LQ9H9S4 337 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 ZDHHC18Q9NUE0 388 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 ACOT9Q9Y305 439 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 RNF11Q9Y3C5 154 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 ATP23Q9Y6H3 246 aa11.94□□□□□ -0.5
VCPKMT-201ENST00000395859 EIF3HO15372 352 aaKnown RBP eCLIP11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 PHGDHO43175 533 aaKnown RBP11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 RRP9O43818 475 aaKnown RBP11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 ALX3O95076 343 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 PSMG1O95456 288 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 AVPP01185 164 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 EPHA1P21709 976 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 ENPP1P22413 925 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 ECHS1P30084 290 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 KHKP50053 298 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 MAPK12P53778 367 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 UBA52P62987 128 aaKnown RBP11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 POU4F1Q01851 419 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 GALNT1Q10472 559 aaPredicted RBP11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 ILF2Q12905 390 aaKnown RBP11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 ZKSCAN8Q15776 578 aaPredicted RBP11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 GLCCI1Q86VQ1 547 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 CCDC116Q8IYX3 515 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 LILRA2Q8N149 483 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 SLC43A2Q8N370 569 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 TEX9Q8N6V9 391 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 WDR31Q8NA23 367 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 TMEM186Q96B77 213 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 MUS81Q96NY9 551 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 PPCSQ9HAB8 311 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 GRHL1Q9NZI5 618 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 NTMQ9P121 344 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 PSME2Q9UL46 239 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 MTO1Q9Y2Z2 717 aaKnown RBP11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 OR10H1Q9Y4A9 318 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 TEX264Q9Y6I9 313 aa11.93□□□□□ -0.5
VCPKMT-201ENST00000395859 EPPK1P58107 5090 aaKnown RBP11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 A0A1W2PR80 420 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 ALG1L2C9J202 215 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 M0R1B8 84 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 UBXN8O00124 270 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 GMFGO60234 142 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 RAD51DO75771 328 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 LINGO3P0C6S8 592 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 IVDP26440 423 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 ELK3P41970 407 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 PIK3CGP48736 1102 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 SNRPD2P62316 118 aaKnown RBP11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 DLG1Q12959 904 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 ACAP2Q15057 778 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 SH2D4BQ5SQS7 431 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 PAGE2Q7Z2X7 111 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 COMMD6Q7Z4G1 85 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 MYLK4Q86YV6 388 aaPredicted RBP11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 EXT2Q93063 718 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 REXO5Q96IC2 774 aaKnown RBP11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 FKRPQ9H9S5 495 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 HIF1ANQ9NWT6 349 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 MED29Q9NX70 200 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 TENM3Q9P273 2699 aa11.92□□□□□ -0.5
VCPKMT-201ENST00000395859 ZNF724A8MTY0 619 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 ATP6V1G2-DDX39BF2Z307 99 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 GUCY1B2O75343 617 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 UTS2O95399 124 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 IGKV1D-16P01601 117 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 S100BP04271 92 aaPredicted RBP11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 IGFBP1P08833 259 aaPredicted RBP11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 NUDT17P0C025 328 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 ME2P23368 584 aa11.91□□□□□ -0.5
VCPKMT-201ENST00000395859 ZFP36P26651 326 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms