RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 NKAIN1Q4KMZ8 207 aa20.46■□□□□ 0.87
HMGA2-203ENST00000393578 ACSM5Q6NUN0 579 aa20.46■□□□□ 0.87
HMGA2-203ENST00000393578 MRGPREQ86SM8 312 aa20.46■□□□□ 0.87
HMGA2-203ENST00000393578 STX19Q8N4C7 294 aa20.46■□□□□ 0.87
HMGA2-203ENST00000393578 FAM26EQ8N5C1 309 aa20.46■□□□□ 0.87
HMGA2-203ENST00000393578 TCEANCQ8N8B7 351 aa20.46■□□□□ 0.87
HMGA2-203ENST00000393578 LSMEM1Q8N8F7 131 aa20.46■□□□□ 0.87
HMGA2-203ENST00000393578 STT3BQ8TCJ2 826 aa20.46■□□□□ 0.87
HMGA2-203ENST00000393578 FCGR1BQ92637 280 aa20.46■□□□□ 0.87
HMGA2-203ENST00000393578 OSTF1Q92882 214 aa20.46■□□□□ 0.87
HMGA2-203ENST00000393578 NXF5Q9H1B4 397 aaKnown RBP20.46■□□□□ 0.87
HMGA2-203ENST00000393578 LIN28AQ9H9Z2 209 aaKnown RBP20.46■□□□□ 0.87
HMGA2-203ENST00000393578 IL20Q9NYY1 176 aa20.46■□□□□ 0.87
HMGA2-203ENST00000393578 A0A0B4J2E0 115 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 A0A1B0GX12 115 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 SERINC4A6NH21 518 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 TIAF1O95411 115 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 IL33O95760 270 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 SP9P0CG40 484 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 EFNB1P98172 346 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 TBCEQ15813 527 aaPredicted RBP20.45■□□□□ 0.86
HMGA2-203ENST00000393578 KLHL26Q53HC5 615 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 SLITRK4Q8IW52 837 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 ADIPOR1Q96A54 375 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 NUDT9Q9BW91 350 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 ZNF223Q9UK11 482 aaPredicted RBP20.45■□□□□ 0.86
HMGA2-203ENST00000393578 MRTO4Q9UKD2 239 aaKnown RBP20.45■□□□□ 0.86
HMGA2-203ENST00000393578 VPS13AQ96RL7 3174 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 TRIM64BA6NI03 449 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 CHP2O43745 196 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 HBQ1P09105 142 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 PIPP12273 146 aaPredicted RBP20.45■□□□□ 0.86
HMGA2-203ENST00000393578 SLC15A1P46059 708 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 OCA2Q04671 838 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 UBE2UQ5VVX9 321 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 CLDN22Q8N7P3 220 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 OR8D4Q8NGM9 314 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 EFHD2Q96C19 240 aaPredicted RBP20.45■□□□□ 0.86
HMGA2-203ENST00000393578 HS6ST2Q96MM7 605 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 FUNDC2Q9BWH2 189 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 UBQLN4Q9NRR5 601 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 FLRT3Q9NZU0 649 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 COPS7AQ9UBW8 275 aa20.45■□□□□ 0.86
HMGA2-203ENST00000393578 COL5A1P20908 1838 aaPredicted RBP20.44■□□□□ 0.86
HMGA2-203ENST00000393578 C2orf92A0A1B0GVN3 265 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 EFCAB7A8K855 629 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 PRKYO43930 277 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 ADAM11O75078 769 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 CSTAP01040 98 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 STSP08842 583 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 ZGLP1P0C6A0 271 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 ST13P50502 369 aaKnown RBP20.44■□□□□ 0.86
HMGA2-203ENST00000393578 LPAL2Q16609 132 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 PHF19Q5T6S3 580 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 MEDAGQ5VYS4 303 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 ZNF620Q6ZNG0 422 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 PPP1R3BQ86XI6 285 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 ZNF527Q8NB42 609 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 OR1N1Q8NGS0 311 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 RNF217Q8TC41 542 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 LMF1Q96S06 567 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 PRRG3Q9BZD7 231 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 SELENONQ9NZV5 590 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 SLC35A3Q9Y2D2 325 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 SPEGQ15772 3267 aa20.44■□□□□ 0.86
HMGA2-203ENST00000393578 NCOR1O75376 2440 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 A0A1B0GWA3 101 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 ENO4A6NNW6 628 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 AGRPO00253 132 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 TLX2O43763 284 aaPredicted RBP20.43■□□□□ 0.86
HMGA2-203ENST00000393578 PRKNO60260 465 aaPredicted RBP20.43■□□□□ 0.86
HMGA2-203ENST00000393578 MAN1A2O60476 641 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 ATE1O95260 518 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 DCDP81605 110 aaKnown RBP20.43■□□□□ 0.86
HMGA2-203ENST00000393578 PRKCDQ05655 676 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 BPHLQ86WA6 291 aaPredicted RBP20.43■□□□□ 0.86
HMGA2-203ENST00000393578 DNAJC27Q9NZQ0 273 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 TMEM5Q9Y2B1 443 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 D6RAR5 112 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 NTN3O00634 580 aaPredicted RBP20.43■□□□□ 0.86
HMGA2-203ENST00000393578 CDC42EP2O14613 210 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 ONECUT2O95948 504 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 PSMB9P28065 219 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 ADH7P40394 386 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 EBPQ15125 230 aaKnown RBP20.43■□□□□ 0.86
HMGA2-203ENST00000393578 SNAPC1Q16533 368 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 PRR23CQ6ZRP0 262 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 ANKRD13BQ86YJ7 626 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 ZNF440Q8IYI8 595 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 CDK20Q8IZL9 346 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 GRHL3Q8TE85 626 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 RNF31Q96EP0 1072 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 SLC38A2Q96QD8 506 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 GPN2Q9H9Y4 310 aaPredicted RBP20.43■□□□□ 0.86
HMGA2-203ENST00000393578 TBC1D23Q9NUY8 699 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 MED31Q9Y3C7 131 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 RPL36Q9Y3U8 105 aaKnown RBP20.43■□□□□ 0.86
HMGA2-203ENST00000393578 CDH10Q9Y6N8 788 aa20.43■□□□□ 0.86
HMGA2-203ENST00000393578 ASCC3Q8N3C0 2202 aaKnown RBP20.42■□□□□ 0.86
HMGA2-203ENST00000393578 OR6C76A6NM76 312 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms