RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 FAM83FQ8NEG4 500 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-204ENST00000392003 C1GALT1C1Q96EU7 318 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 SLC35A4Q96G79 324 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 CCDC32Q9BV29 185 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 SEMA4GQ9NTN9 838 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 CYP8B1Q9UNU6 501 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 HYKKA2RU49 373 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 SNX4O95219 450 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 FCER2P06734 321 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 EDN3P14138 238 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 POU3F3P20264 500 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-204ENST00000392003 LTBRP36941 435 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 MAN2A2P49641 1150 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 PDX1P52945 283 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 SIM1P81133 766 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-204ENST00000392003 CHRDL2Q6WN34 429 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 WDR53Q7Z5U6 358 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-204ENST00000392003 RANBP3LQ86VV4 465 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-204ENST00000392003 SMRP1Q8NCR6 262 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 CDS1Q92903 461 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 SLC41A3Q96GZ6 507 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 MSANTD3Q96H12 275 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 SLC6A18Q96N87 628 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 NDUFB11Q9NX14 153 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 NLGN3Q9NZ94 848 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 ZNF624Q9P2J8 865 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-204ENST00000392003 ZNF443Q9Y2A4 671 aaPredicted RBP8.99□□□□□ -0.97
COL6A3-204ENST00000392003 OR6C74A6NCV1 312 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 POM121CA8CG34 1229 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 HMGN1P05114 100 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 HBQ1P09105 142 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 CDH11P55287 796 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 CEBPEQ15744 281 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 DECR1Q16698 335 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 MINDY4Q4G0A6 757 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 ZNF542PQ5EBM4 170 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 PAQR6Q6TCH4 344 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 CDH24Q86UP0 819 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 OR4N5Q8IXE1 308 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 SLC16A11Q8NCK7 471 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 OR7G2Q8NG99 324 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 OR4M2Q8NGB6 313 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 DIO2Q92813 273 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 UFD1Q92890 307 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 OTULINQ96BN8 352 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 ZG16BQ96DA0 208 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 GPA33Q99795 319 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 TMEM168Q9H0V1 697 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 ADAP2Q9NPF8 381 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 ACTR10Q9NZ32 417 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 PTGFRNQ9P2B2 879 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 CLCA2Q9UQC9 943 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 GPR52Q9Y2T5 361 aa8.99□□□□□ -0.97
COL6A3-204ENST00000392003 WWP2O00308 870 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 CDRT1O95170 752 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 APOL3O95236 402 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 EML2O95834 649 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 CH25HO95992 272 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 UGT2B7P16662 529 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 TNFSF8P32971 234 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 TALDO1P37837 337 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 RPS19P39019 145 aaKnown RBP8.98□□□□□ -0.97
COL6A3-204ENST00000392003 ETV5P41161 510 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 HOXC5Q00444 222 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 MXD1Q05195 221 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 MAP4K2Q12851 820 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 FBXO42Q6P3S6 717 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 Q6ZSR6 202 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 TAF8Q7Z7C8 310 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 LNX2Q8N448 690 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 CCL4L1Q8NHW4 92 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 TTC9Q92623 222 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 TMEM203Q969S6 136 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 KCTD7Q96MP8 289 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 PLA2G12AQ9BZM1 189 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 FGF20Q9NP95 211 aaPredicted RBP8.98□□□□□ -0.97
COL6A3-204ENST00000392003 TNFRSF10CO14798 259 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 FCMRO60667 390 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 CPNE3O75131 537 aaKnown RBP8.98□□□□□ -0.97
COL6A3-204ENST00000392003 GNSP15586 552 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 NT5EP21589 574 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 CRYBB2P43320 205 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 GPR4P46093 362 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 LIMK1P53667 647 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 LSM11P83369 360 aaKnown RBP eCLIP8.98□□□□□ -0.97
COL6A3-204ENST00000392003 CRTC2Q53ET0 693 aaPredicted RBP8.98□□□□□ -0.97
COL6A3-204ENST00000392003 TMEM92Q6UXU6 159 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 ZNF438Q7Z4V0 828 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 CCDC190Q86UF4 302 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 KIF18BQ86Y91 864 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 NRMQ8IXM6 262 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 DMRTC2Q8IXT2 367 aaPredicted RBP8.98□□□□□ -0.97
COL6A3-204ENST00000392003 CA5BP1Q8WTZ4 195 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 RIT1Q92963 219 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 TRIM63Q969Q1 353 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 TMCO6Q96DC7 493 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 ZFYVE21Q9BQ24 234 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 GPR174Q9BXC1 333 aa8.98□□□□□ -0.97
COL6A3-204ENST00000392003 RANBP3Q9H6Z4 567 aaPredicted RBP8.98□□□□□ -0.97
COL6A3-204ENST00000392003 GPR55Q9Y2T6 319 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms