RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 A0A087WUU8 490 aa11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 C9orf172C9J069 976 aa11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 C9J4A7 227 aa11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 PLD2O14939 933 aa11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 SLC16A6O15403 523 aa11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 ZNF354AO60765 605 aaPredicted RBP11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 UTS2O95399 124 aa11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 IGFBP1P08833 259 aaPredicted RBP11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 RYKP34925 604 aa11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 RPP38P78345 283 aaKnown RBP11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 TARDBPQ13148 414 aaKnown RBP eCLIP11.22□□□□□ -0.614e-6■■■■□ 19.5
SPTBN1-203ENST00000389980 OR1Q1Q15612 314 aa11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 MEP1AQ16819 746 aa11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 CTU2Q2VPK5 515 aaKnown RBP11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 RANBP3LQ86VV4 465 aaPredicted RBP11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 C8orf59Q8N0T1 100 aaPredicted RBP11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 ZNF441Q8N8Z8 693 aa11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 TMEM255BQ8WV15 326 aa11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 UBE2FQ969M7 185 aa11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 SLC35B4Q969S0 331 aa11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 LIN37Q96GY3 246 aaPredicted RBP11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 GPA33Q99795 319 aa11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 ZNF556Q9HAH1 456 aa11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 FOXJ2Q9P0K8 574 aa11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 POFUT2Q9Y2G5 429 aa11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 PTPRZ1P23471 2315 aaPredicted RBP11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 FAM186AA6NE01 2351 aa11.22□□□□□ -0.61
SPTBN1-203ENST00000389980 TRBV11-1A0A0K0K1C0 115 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 SPAARA0A1B0GVQ0 90 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 SERINC4A6NH21 518 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 C17orf51A8MQB3 221 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 ICOSLGO75144 302 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 SOX14O95416 240 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 OXSR1O95747 527 aaPredicted RBP11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 GUSBP08236 651 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 CDH2P19022 906 aaPredicted RBP11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 MMP11P24347 488 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 ABCD3P28288 659 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 ST13P50502 369 aaKnown RBP11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 DCAF7P61962 342 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 RPS18P62269 152 aaKnown RBP11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 PLCXD2Q0VAA5 305 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 ST3GAL3Q11203 375 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 CD226Q15762 336 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 ZNF691Q5VV52 312 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 HSDL2Q6YN16 418 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 Q6ZNX1 250 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 NCCRP1Q6ZVX7 275 aaPredicted RBP11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 THAP5Q7Z6K1 395 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 ZER1Q7Z7L7 766 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 CCDC71Q8IV32 467 aaPredicted RBP11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 GRHL3Q8TE85 626 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 OMA1Q96E52 524 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 PSD2Q9BQI7 771 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 GABARAPL3Q9BY60 117 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 RTN4RQ9BZR6 473 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 SEMA4CQ9C0C4 833 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 ARMC7Q9H6L4 198 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 PLGRKTQ9HBL7 147 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 GMPPBQ9Y5P6 360 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 CEP250Q9BV73 2442 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 MPDZO75970 2070 aa11.21□□□□□ -0.61
SPTBN1-203ENST00000389980 EXPH5Q8NEV8 1989 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 ARRDC5A6NEK1 342 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 OR6C76A6NM76 312 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 WWP2O00308 870 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 OIP5O43482 229 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 PIP5K1CO60331 668 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 LRP3O75074 770 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 UGT2B11O75310 529 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 TRMUO75648 421 aaKnown RBP11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 CSTAP01040 98 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 CELA2AP08217 269 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 IL12BP29460 328 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 NBL1P41271 181 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 ACAA2P42765 397 aaKnown RBP11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 SLC26A5P58743 744 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 CD47Q08722 323 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 TRAM2Q15035 370 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 KLHL26Q53HC5 615 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 TMEM236Q5W0B7 351 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 ZNF730Q6ZMV8 503 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 WDR88Q6ZMY6 472 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 PRICKLE2Q7Z3G6 844 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 SLC38A4Q969I6 547 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 DEPDC7Q96QD5 511 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 ING2Q9H160 280 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 ZBTB20Q9HC78 741 aaPredicted RBP11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 UBQLN4Q9NRR5 601 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 NXT1Q9UKK6 140 aaKnown RBP11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 PADI1Q9ULC6 663 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 NDRG4Q9ULP0 352 aaKnown RBP11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 PCDHGA1Q9Y5H4 931 aa11.21□□□□□ -0.62
SPTBN1-203ENST00000389980 CCDC187A0A096LP49 1063 aa11.2□□□□□ -0.62
SPTBN1-203ENST00000389980 TMEM200CA6NKL6 621 aa11.2□□□□□ -0.62
SPTBN1-203ENST00000389980 TMX2-CTNND1H3BSU7 103 aa11.2□□□□□ -0.62
SPTBN1-203ENST00000389980 MASP2O00187 686 aa11.2□□□□□ -0.62
SPTBN1-203ENST00000389980 GMFGO60234 142 aa11.2□□□□□ -0.62
SPTBN1-203ENST00000389980 TSPAN2O60636 221 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms