RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 PGM1P36871 562 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 MAGEA5P43359 124 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 MLLT10P55197 1068 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 GABPB1Q06547 395 aaPredicted RBP11.53□□□□□ -0.56
SMN1-202ENST00000380707 SKP2Q13309 424 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 LARS2Q15031 903 aaKnown RBP11.53□□□□□ -0.56
SMN1-202ENST00000380707 LIN52Q52LA3 116 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 MRPL2Q5T653 305 aaKnown RBP11.53□□□□□ -0.56
SMN1-202ENST00000380707 CCDC121Q6ZUS5 278 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 PATL1Q86TB9 770 aaKnown RBP11.53□□□□□ -0.56
SMN1-202ENST00000380707 COMTD1Q86VU5 262 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 ARMC8Q8IUR7 673 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 TMEM251Q8N6I4 163 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 FADS6Q8N9I5 356 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 SMYD1Q8NB12 490 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 FAM71CQ8NEG0 241 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 OR2M3Q8NG83 312 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 FIG4Q92562 907 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 CNOT9Q92600 299 aaKnown RBP11.53□□□□□ -0.56
SMN1-202ENST00000380707 TAMM41Q96BW9 452 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 ARSGQ96EG1 525 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 THTPAQ9BU02 230 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 SPATA5L1Q9BVQ7 753 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 TSPAN10Q9H1Z9 355 aaPredicted RBP11.53□□□□□ -0.56
SMN1-202ENST00000380707 ZNF703Q9H7S9 590 aaPredicted RBP11.53□□□□□ -0.56
SMN1-202ENST00000380707 SEC14L3Q9UDX4 400 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 ICAM5Q9UMF0 924 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 ZNF232Q9UNY5 417 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 SLC35A3Q9Y2D2 325 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 C15orf41Q9Y2V0 281 aa11.53□□□□□ -0.56
SMN1-202ENST00000380707 COL6A6A6NMZ7 2263 aa11.52□□□□□ -0.56
SMN1-202ENST00000380707 CDHR4A6H8M9 788 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 CXCR6O00574 342 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 GSTA4O15217 222 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 ADAM11O75078 769 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 PDE5AO76074 875 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 EPPINO95925 133 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 CELA3AP09093 270 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 GGT1P19440 569 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 ENDOUP21128 410 aaKnown RBP11.52□□□□□ -0.57
SMN1-202ENST00000380707 PRKAR1BP31321 381 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 KDELR2P33947 212 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 RASSF2P50749 326 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 NCALDP61601 193 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 FXNQ16595 210 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 DUSP7Q16829 419 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 SPATS1Q496A3 300 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 GLIPR1L2Q4G1C9 344 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 DNAL1Q4LDG9 190 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 RNF220Q5VTB9 566 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 ZNF324BQ6AW86 544 aaPredicted RBP11.52□□□□□ -0.57
SMN1-202ENST00000380707 FAM180AQ6UWF9 173 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 SLC22A16Q86VW1 577 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 SIAH3Q8IW03 269 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 CMIPQ8IY22 773 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 ARHGAP24Q8N264 748 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 TNIP2Q8NFZ5 429 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 OR4K17Q8NGC6 315 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 B4GALNT2Q8NHY0 566 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 ZNF524Q96C55 264 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 CADM1Q9BY67 442 aaKnown RBP11.52□□□□□ -0.57
SMN1-202ENST00000380707 LAT2Q9GZY6 243 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 PCDHAC1Q9H158 963 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 CACYBPQ9HB71 228 aaKnown RBP11.52□□□□□ -0.57
SMN1-202ENST00000380707 ASF1BQ9NVP2 202 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 DNAJB12Q9NXW2 375 aaKnown RBP11.52□□□□□ -0.57
SMN1-202ENST00000380707 PRPF19Q9UMS4 504 aaKnown RBP11.52□□□□□ -0.57
SMN1-202ENST00000380707 NCKAP5O14513 1909 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 PCNX3Q9H6A9 2034 aa11.52□□□□□ -0.57
SMN1-202ENST00000380707 TMEM229AB2RXF0 380 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 TFECO14948 347 aaPredicted RBP11.51□□□□□ -0.57
SMN1-202ENST00000380707 GSC2O15499 205 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 SUV39H1O43463 412 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 EIF4E2O60573 245 aaKnown RBP11.51□□□□□ -0.57
SMN1-202ENST00000380707 CYP7B1O75881 506 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 DNAJC8O75937 253 aaPredicted RBP11.51□□□□□ -0.57
SMN1-202ENST00000380707 PDE9AO76083 593 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 CRYABP02511 175 aaKnown RBP11.51□□□□□ -0.57
SMN1-202ENST00000380707 CD247P20963 164 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 MST1P26927 711 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 GDF1P27539 372 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 MSX1P28360 303 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 ALDH6A1Q02252 535 aaKnown RBP11.51□□□□□ -0.57
SMN1-202ENST00000380707 LRRC23Q53EV4 343 aaPredicted RBP11.51□□□□□ -0.57
SMN1-202ENST00000380707 CMPK2Q5EBM0 449 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 GLYATQ6IB77 296 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 DHRS4L2Q6PKH6 230 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 ARSKQ6UWY0 536 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 TMCO5AQ8N6Q1 288 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 FAR1Q8WVX9 515 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 BARD1Q99728 777 aaKnown RBP11.51□□□□□ -0.57
SMN1-202ENST00000380707 WFDC6Q9BQY6 131 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 DEFB127Q9H1M4 99 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 ZDHHC11Q9H8X9 412 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 B4GALT7Q9UBV7 327 aa11.51□□□□□ -0.57
SMN1-202ENST00000380707 NPIPA5E9PKD4 350 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 ACOT7O00154 380 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 FRS3O43559 492 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 ZIC3O60481 467 aa11.5□□□□□ -0.57
SMN1-202ENST00000380707 CDC40O60508 579 aaKnown RBP eCLIP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms