RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 CCR5P51681 352 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 MXD1Q05195 221 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 GAS6Q14393 721 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 OR1Q1Q15612 314 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 KLHL22Q53GT1 634 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 HSDL2Q6YN16 418 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 LHFPL3Q86UP9 236 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 OOSP2Q86WS3 158 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 ZNF655Q8N720 491 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 ZFP41Q8N8Y5 198 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 CDRT4Q8N9R6 151 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 OR4N2Q8NGD1 307 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 LILRB1Q8NHL6 650 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 SLC38A2Q96QD8 506 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 NUAK2Q9H093 628 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 RACGAP1Q9H0H5 632 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 TRIM45Q9H8W5 580 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 FGF20Q9NP95 211 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 PRDM9Q9NQV7 894 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 DUSP22Q9NRW4 184 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 SNTG1Q9NSN8 517 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 MRPS18AQ9NVS2 196 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 POMT2Q9UKY4 750 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 STUB1Q9UNE7 303 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 CFL2Q9Y281 166 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 SPIN1Q9Y657 262 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 HEATR5AQ86XA9 2040 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 A0A0A6YYC8 382 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 A0A1W2PPC4 97 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 HYKKA2RU49 373 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 CDHR4A6H8M9 788 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 OR5K4A6NMS3 321 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 I3L1I5 382 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 CHST10O43529 356 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 DBIP07108 87 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 NID1P14543 1247 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 S1PR1P21453 382 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 SOX6P35712 828 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 WNT4P56705 351 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 MAT1AQ00266 395 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 PRKCDQ05655 676 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 RAB40BQ12829 278 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 C1DQ13901 141 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 MINDY4Q4G0A6 757 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 C3orf38Q5JPI3 329 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 AADACL4Q5VUY2 407 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 NANOGNBQ7Z5D8 188 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 CADM3Q8N126 398 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 OR52R1Q8NGF1 315 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 OSTF1Q92882 214 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 SDHCQ99643 169 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 SEMA6CQ9H3T2 930 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 TXNL4BQ9NX01 149 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 HCN3Q9P1Z3 774 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 SEC14L4Q9UDX3 406 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 ZNF223Q9UK11 482 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 DTX4Q9Y2E6 619 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 SPACA6W5XKT8 324 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 ZC3H12DA2A288 527 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 SMIM30A4D0T7 59 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 SOCS6O14544 535 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 BRINP1O60477 761 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 RFPL3O75679 317 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 WNT1P04628 370 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 CLEC2LP0C7M8 214 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 CPEP16870 476 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 MYL12AP19105 171 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 MAOBP27338 520 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 EPHA4P54764 986 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 CDH11P55287 796 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 RAB38P57729 211 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 RPS25P62851 125 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 PSG6Q00889 435 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 PGGHGQ32M88 737 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 MANEAQ5SRI9 462 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 C22orf42Q6IC83 251 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 CCDC190Q86UF4 302 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 PARGQ86W56 976 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 OR9Q1Q8NGQ5 310 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 KLHDC7BQ96G42 594 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 NELL2Q99435 816 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 STACQ99469 402 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 TM9SF2Q99805 663 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 ZNF649Q9BS31 505 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 MED20Q9H944 212 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 HINT3Q9NQE9 182 aaKnown RBP7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 NLGN3Q9NZ94 848 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 CBLCQ9ULV8 474 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 SATB2Q9UPW6 733 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 PEX16Q9Y5Y5 336 aa7.38□□□□□ -1.23
PDLIM5-204ENST00000380176 TMEM238LA0A1B0GVL6 79 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 TRAPPC13A5PLN9 417 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 VSTM5A8MXK1 200 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 ZNF670-ZNF695F2Z2N8 137 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 KCNK2O95069 426 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 IGKV1D-16P01601 117 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 CHRNB1P11230 501 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 SPNP16150 400 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 SSTR4P31391 388 aa7.37□□□□□ -1.23
PDLIM5-204ENST00000380176 TNFSF8P32971 234 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms