RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 EPYCQ99645 322 aa10.07□□□□□ -0.8
NEDD9-201ENST00000379433 EGLN3Q9H6Z9 239 aa10.07□□□□□ -0.8
NEDD9-201ENST00000379433 EXOSC4Q9NPD3 245 aaKnown RBP10.07□□□□□ -0.8
NEDD9-201ENST00000379433 ERGIC3Q9Y282 383 aa10.07□□□□□ -0.8
NEDD9-201ENST00000379433 WDR45Q9Y484 360 aa10.07□□□□□ -0.8
NEDD9-201ENST00000379433 CNOT1A5YKK6 2376 aaKnown RBP10.07□□□□□ -0.8
NEDD9-201ENST00000379433 NDUFA2O43678 99 aa10.07□□□□□ -0.8
NEDD9-201ENST00000379433 TLX2O43763 284 aaPredicted RBP10.07□□□□□ -0.8
NEDD9-201ENST00000379433 SEMG1P04279 462 aa10.07□□□□□ -0.8
NEDD9-201ENST00000379433 KRT8P05787 483 aa10.07□□□□□ -0.8
NEDD9-201ENST00000379433 CCNYL3P0C7X3 344 aa10.07□□□□□ -0.8
NEDD9-201ENST00000379433 MAOAP21397 527 aa10.07□□□□□ -0.8
NEDD9-201ENST00000379433 CD38P28907 300 aa10.07□□□□□ -0.8
NEDD9-201ENST00000379433 GABRA3P34903 492 aa10.07□□□□□ -0.8
NEDD9-201ENST00000379433 ST3GAL4Q11206 333 aa10.07□□□□□ -0.8
NEDD9-201ENST00000379433 ZNF730Q6ZMV8 503 aa10.07□□□□□ -0.8
NEDD9-201ENST00000379433 ADCK1Q86TW2 530 aa10.07□□□□□ -0.8
NEDD9-201ENST00000379433 OR4K5Q8NGD3 323 aa10.07□□□□□ -0.8
NEDD9-201ENST00000379433 FAM46AQ96IP4 442 aaKnown RBP10.07□□□□□ -0.8
NEDD9-201ENST00000379433 FBRSQ9HAH7 460 aa10.07□□□□□ -0.8
NEDD9-201ENST00000379433 ACSS1Q9NUB1 689 aaPredicted RBP10.07□□□□□ -0.8
NEDD9-201ENST00000379433 MAT2BQ9NZL9 334 aa10.07□□□□□ -0.8
NEDD9-201ENST00000379433 NDRG4Q9ULP0 352 aaKnown RBP10.07□□□□□ -0.8
NEDD9-201ENST00000379433 IGHV1OR15-9A0A0B4J2B8 117 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 OR2A25A4D2G3 310 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 SLC16A6O15403 523 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 EMC8O43402 210 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 UBXN7O94888 489 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 ALX3O95076 343 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 BCL10O95999 233 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 CT62P0C5K7 136 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 BCKDHBP21953 392 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 HOXA6P31267 233 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 OR1D4P47884 311 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 SLC16A1P53985 500 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 EMP3P54852 163 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 AANATQ16613 207 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 CCDC157Q569K6 752 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 BHLHB9Q6PI77 547 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 SLC22A25Q6T423 547 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 DGAT2L6Q6ZPD8 337 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 ZNF655Q8N720 491 aaPredicted RBP10.06□□□□□ -0.8
NEDD9-201ENST00000379433 COX18Q8N8Q8 333 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 OR4N2Q8NGD1 307 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 NDNFQ8TB73 568 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 ST8SIA2Q92186 375 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 HLA-CQ95604 372 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 ZNF354BQ96LW1 612 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 ERVMER34-1Q9H9K5 563 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 DHCR7Q9UBM7 475 aaKnown RBP10.06□□□□□ -0.8
NEDD9-201ENST00000379433 SH3PXD2BA1X283 911 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 M0R3G1 203 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 TP53P04637 393 aaPredicted RBP10.06□□□□□ -0.8
NEDD9-201ENST00000379433 ALPPP05187 535 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 ELAVL4P26378 380 aaKnown RBP10.06□□□□□ -0.8
NEDD9-201ENST00000379433 SSTR4P31391 388 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 BMI1P35226 326 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 ARL4DP49703 201 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 GP2P55259 537 aaKnown RBP10.06□□□□□ -0.8
NEDD9-201ENST00000379433 YPEL5P62699 121 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 ZNF155Q12901 538 aaPredicted RBP10.06□□□□□ -0.8
NEDD9-201ENST00000379433 C1orf189Q5VU69 101 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 TPRA1Q86W33 373 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 ARL14Q8N4G2 192 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 ZNF671Q8TAW3 534 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 IFI44Q8TCB0 444 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 APH1BQ8WW43 257 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 DSN1Q9H410 356 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 CACYBPQ9HB71 228 aaKnown RBP10.06□□□□□ -0.8
NEDD9-201ENST00000379433 VSX1Q9NZR4 365 aaPredicted RBP10.06□□□□□ -0.8
NEDD9-201ENST00000379433 POU2F3Q9UKI9 436 aa10.06□□□□□ -0.8
NEDD9-201ENST00000379433 URADA6NGE7 173 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 ZNF99A8MXY4 864 aaPredicted RBP10.05□□□□□ -0.8
NEDD9-201ENST00000379433 RBBP9O75884 186 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 PDE9AO76083 593 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 FOSL2P15408 326 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 UGT2B15P54855 530 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 CDC42P60953 191 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 TNFRSF17Q02223 184 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 DMWDQ09019 674 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 ZNF267Q14586 743 aaPredicted RBP10.05□□□□□ -0.8
NEDD9-201ENST00000379433 SLC35F1Q5T1Q4 408 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 CASP12Q6UXS9 341 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 ABI3BPQ7Z7G0 1075 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 CDH24Q86UP0 819 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 DENND6BQ8NEG7 585 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 OR52P1PQ8NH57 321 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 RDH12Q96NR8 316 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 GPA33Q99795 319 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 ANKHQ9HCJ1 492 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 USP36Q9P275 1121 aaKnown RBP10.05□□□□□ -0.8
NEDD9-201ENST00000379433 SPACA6W5XKT8 324 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 A0A0J9YY10 115 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 GXYLT2A0PJZ3 443 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 ARGFXA6NJG6 315 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 DOK2O60496 412 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 SERPINB1P30740 379 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 LPAL2Q16609 132 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 ADPRMQ3LIE5 342 aa10.05□□□□□ -0.8
NEDD9-201ENST00000379433 MRM1Q6IN84 353 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms