RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 IMPA2O14732 288 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 RNF13O43567 381 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 SEC14L2O76054 403 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 CLEC2LP0C7M8 214 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 DRD2P14416 443 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 VASPP50552 380 aaPredicted RBP7.53□□□□□ -1.2
CKAP2-203ENST00000378037 CLDN12P56749 244 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 TNFRSF17Q02223 184 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 IL18Q14116 193 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 ARHGAP19Q14CB8 494 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 TRAM2Q15035 370 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 TMEM35AQ53FP2 167 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 FAM27D1Q5T7N8 215 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 CBLN3Q6UW01 205 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 PTRH1Q86Y79 214 aaKnown RBP7.53□□□□□ -1.2
CKAP2-203ENST00000378037 LAS2Q8IYD9 372 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 PHF21AQ96BD5 680 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 SAP130Q9H0E3 1048 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 ARRDC1-AS1Q9H2J1 176 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 PLGRKTQ9HBL7 147 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 TMEM165Q9HC07 324 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 C20orf141Q9NUB4 165 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 SSR3Q9UNL2 185 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 NLRC5Q86WI3 1866 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 DCHS1Q96JQ0 3298 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 C12orf71A8MTZ7 269 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 PRR23D1E9PI22 279 aaPredicted RBP7.53□□□□□ -1.2
CKAP2-203ENST00000378037 BOLA2-SMG1P6H3BVE0 249 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 KIAA0513O60268 411 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 SCRG1O75711 98 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 PRR23D2P0DMB1 279 aaPredicted RBP7.53□□□□□ -1.2
CKAP2-203ENST00000378037 ELAVL4P26378 380 aaKnown RBP7.53□□□□□ -1.2
CKAP2-203ENST00000378037 LIPAP38571 399 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 OPRL1P41146 370 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 HLCSP50747 726 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 PPP2R2BQ00005 443 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 HNRNPA0Q13151 305 aaKnown RBP7.53□□□□□ -1.2
CKAP2-203ENST00000378037 GRM7Q14831 915 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 GLYR1Q49A26 553 aaPredicted RBP7.53□□□□□ -1.2
CKAP2-203ENST00000378037 C3orf38Q5JPI3 329 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 SLC29A4Q7RTT9 530 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 JAZF1Q86VZ6 243 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 TRIM69Q86WT6 500 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 GALNT15Q8N3T1 639 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 MFSD9Q8NBP5 474 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 NPRL2Q8WTW4 380 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 PAK1IP1Q9NWT1 392 aaPredicted RBP7.53□□□□□ -1.2
CKAP2-203ENST00000378037 AP3M1Q9Y2T2 418 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 CEPT1Q9Y6K0 416 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 ATMQ13315 3056 aa7.53□□□□□ -1.2
CKAP2-203ENST00000378037 GBF1Q92538 1859 aa7.52□□□□□ -1.2
CKAP2-203ENST00000378037 C4orf47A7E2U8 309 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 XKRYO14609 159 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 ASNA1O43681 348 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 CD27P26842 260 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 SOX18P35713 384 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 EIF2B2P49770 351 aaKnown RBP7.52□□□□□ -1.21
CKAP2-203ENST00000378037 ITGA1P56199 1179 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 SMIM11AP58511 58 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 RACK1P63244 317 aaKnown RBP7.52□□□□□ -1.21
CKAP2-203ENST00000378037 TXNL4AP83876 142 aaKnown RBP7.52□□□□□ -1.21
CKAP2-203ENST00000378037 APOFQ13790 326 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 MELKQ14680 651 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 OR1Q1Q15612 314 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 LRIF1Q5T3J3 769 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 CWF19L1Q69YN2 538 aaKnown RBP7.52□□□□□ -1.21
CKAP2-203ENST00000378037 MFSD12Q6NUT3 480 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 COMTD1Q86VU5 262 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 PLPP6Q8IY26 295 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 SYNPOQ8N3V7 929 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 C16orf52Q8NHV5 167 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 CEP76Q8TAP6 659 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 KLHL6Q8WZ60 621 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 GGHQ92820 318 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 RASD2Q96D21 266 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 MS4A4EQ96PG1 132 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 OR2A5Q96R48 311 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 OR1F2PQ96R84 312 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 SERINC2Q96SA4 455 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 ULBP3Q9BZM4 244 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 NXF5Q9H1B4 397 aaKnown RBP7.52□□□□□ -1.21
CKAP2-203ENST00000378037 SLC25A18Q9H1K4 315 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 SLC52A3Q9NQ40 469 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 LHX9Q9NQ69 397 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 NECTIN3Q9NQS3 549 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 AP1M2Q9Y6Q5 423 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 APOA1P02647 267 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 ACVR2AP27037 513 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 ADH7P40394 386 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 EIF2DP41214 584 aaKnown RBP7.52□□□□□ -1.21
CKAP2-203ENST00000378037 GIPRP48546 466 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 PRKXP51817 358 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 SMSP52788 366 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 NFATC3Q12968 1075 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 CBX3Q13185 183 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 INPP5JQ15735 1006 aaPredicted RBP7.52□□□□□ -1.21
CKAP2-203ENST00000378037 FCRL6Q6DN72 434 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 NANOGNBQ7Z5D8 188 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 PLXDC1Q8IUK5 500 aa7.52□□□□□ -1.21
CKAP2-203ENST00000378037 ABHD11Q8NFV4 315 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms