RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 SLC30A8Q8IWU4 369 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 WDR60Q8WVS4 1066 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 RELTQ969Z4 430 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 ZG16BQ96DA0 208 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 HOPXQ9BPY8 73 aaPredicted RBP12.02□□□□□ -0.49
CKAP2-202ENST00000378034 PRDM4Q9UKN5 801 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 ICAM5Q9UMF0 924 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 CARD8Q9Y2G2 431 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 IFT52Q9Y366 437 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 L3MBTL1Q9Y468 752 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 ESPL1Q14674 2120 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 NBASA2RRP1 2371 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 UBR5O95071 2799 aaPredicted RBP12.02□□□□□ -0.49
CKAP2-202ENST00000378034 FREM3P0C091 2139 aa12.02□□□□□ -0.49
CKAP2-202ENST00000378034 C7orf72A4D263 438 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 PGM3O95394 542 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 THBS1P07996 1170 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 NID1P14543 1247 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 ETS2P15036 469 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 IL7RP16871 459 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 ZNF41P51814 821 aaPredicted RBP12.01□□□□□ -0.49
CKAP2-202ENST00000378034 GFRA1P56159 465 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 ADRM1Q16186 407 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 CYP51A1Q16850 503 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 GLIPR1L2Q4G1C9 344 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 C4orf17Q53FE4 359 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 WLSQ5T9L3 541 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 C10orf111Q8N326 155 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 C11orf65Q8NCR3 313 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 FAM71CQ8NEG0 241 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 OR52P1PQ8NH57 321 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 MAL2Q969L2 176 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 ZBTB8AQ96BR9 441 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 ARSGQ96EG1 525 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 SH3YL1Q96HL8 342 aaPredicted RBP12.01□□□□□ -0.49
CKAP2-202ENST00000378034 PIGQQ9BRB3 760 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 EXOSC3Q9NQT5 275 aaKnown RBP12.01□□□□□ -0.49
CKAP2-202ENST00000378034 SPRR3Q9UBC9 169 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 ACAD8Q9UKU7 415 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 ZNF232Q9UNY5 417 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 RP1L1Q8IWN7 2480 aaPredicted RBP12.01□□□□□ -0.49
CKAP2-202ENST00000378034 POLEQ07864 2286 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 ZNF407Q9C0G0 2248 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 GTF3C1Q12789 2109 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 CENPVL1A0A0U1RR11 272 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 NPIPA2E9PIF3 369 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 NPIPA3F8WFD2 350 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 AIM2O14862 343 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 DNAJA2O60884 412 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 TPOP07202 933 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 HOXD4P09016 255 aaPredicted RBP12.01□□□□□ -0.49
CKAP2-202ENST00000378034 ZNF17P17021 662 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 BMP7P18075 431 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 PGM1P36871 562 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 CRYZQ08257 329 aaKnown RBP12.01□□□□□ -0.49
CKAP2-202ENST00000378034 SKP2Q13309 424 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 ART3Q13508 389 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 CBFBQ13951 182 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 SCARB2Q14108 478 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 SELPLGQ14242 412 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 LARS2Q15031 903 aaKnown RBP12.01□□□□□ -0.49
CKAP2-202ENST00000378034 LIN52Q52LA3 116 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 CBLN3Q6UW01 205 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 ENPP6Q6UWR7 440 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 KRT73Q86Y46 540 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 PM20D2Q8IYS1 436 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 HIPK4Q8NE63 616 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 OR5W2Q8NH69 310 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 NFKBIDQ8NI38 313 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 ABTB1Q969K4 478 aaPredicted RBP12.01□□□□□ -0.49
CKAP2-202ENST00000378034 SFXN2Q96NB2 322 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 ECSITQ9BQ95 431 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 GPATCH1Q9BRR8 931 aaKnown RBP12.01□□□□□ -0.49
CKAP2-202ENST00000378034 SLC39A3Q9BRY0 314 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 SPATA5L1Q9BVQ7 753 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 QRSL1Q9H0R6 528 aaKnown RBP12.01□□□□□ -0.49
CKAP2-202ENST00000378034 ARMC7Q9H6L4 198 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 ANGPT4Q9Y264 503 aa12.01□□□□□ -0.49
CKAP2-202ENST00000378034 TRGV8A0A0C4DH27 118 aa12□□□□□ -0.49
CKAP2-202ENST00000378034 NDUFAB1O14561 156 aa12□□□□□ -0.49
CKAP2-202ENST00000378034 EIF1P41567 113 aaKnown RBP12□□□□□ -0.49
CKAP2-202ENST00000378034 B3GALT5-AS1P59052 145 aa12□□□□□ -0.49
CKAP2-202ENST00000378034 SF3B4Q15427 424 aaKnown RBP eCLIP12□□□□□ -0.493e-7■■□□□ 14.4
CKAP2-202ENST00000378034 BCL2A1Q16548 175 aa12□□□□□ -0.49
CKAP2-202ENST00000378034 C3AR1Q16581 482 aa12□□□□□ -0.49
CKAP2-202ENST00000378034 TMEM44Q2T9K0 475 aa12□□□□□ -0.49
CKAP2-202ENST00000378034 GXYLT1Q4G148 440 aa12□□□□□ -0.49
CKAP2-202ENST00000378034 RNF220Q5VTB9 566 aa12□□□□□ -0.49
CKAP2-202ENST00000378034 PTOV1Q86YD1 416 aa12□□□□□ -0.49
CKAP2-202ENST00000378034 DOLPP1Q86YN1 238 aa12□□□□□ -0.49
CKAP2-202ENST00000378034 OR10A6Q8NH74 314 aa12□□□□□ -0.49
CKAP2-202ENST00000378034 GPR119Q8TDV5 335 aa12□□□□□ -0.49
CKAP2-202ENST00000378034 ZNF607Q96SK3 696 aa12□□□□□ -0.49
CKAP2-202ENST00000378034 TIMP4Q99727 224 aa12□□□□□ -0.49
CKAP2-202ENST00000378034 UGT2B28Q9BY64 529 aa12□□□□□ -0.49
CKAP2-202ENST00000378034 TP63Q9H3D4 680 aaPredicted RBP12□□□□□ -0.49
CKAP2-202ENST00000378034 MED17Q9NVC6 651 aa12□□□□□ -0.49
CKAP2-202ENST00000378034 SLC5A6Q9Y289 635 aa12□□□□□ -0.49
CKAP2-202ENST00000378034 SLC6A5Q9Y345 797 aa12□□□□□ -0.49
CKAP2-202ENST00000378034 DNAJC13O75165 2243 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms