RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 NMUR2Q9GZQ4 415 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 OR51I1Q9H343 314 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 SERHL2Q9H4I8 314 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 WDR55Q9H6Y2 383 aaPredicted RBP15.16■□□□□ 0.02
HMGN4-201ENST00000377575 ARGLU1Q9NWB6 273 aaPredicted RBP15.16■□□□□ 0.02
HMGN4-201ENST00000377575 BTNL2Q9UIR0 455 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 PACSIN3Q9UKS6 424 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 DTNAQ9Y4J8 743 aa15.16■□□□□ 0.02
HMGN4-201ENST00000377575 A0A1W2PNV4 684 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 NPIPB9F8W1W9 429 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 H0YC42 278 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 GTPBP1O00178 669 aaKnown RBP15.15■□□□□ 0.02
HMGN4-201ENST00000377575 STX11O75558 287 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 NUDT14O95848 222 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 PGRP06401 933 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 EIF1P41567 113 aaKnown RBP15.15■□□□□ 0.02
HMGN4-201ENST00000377575 P2RX1P51575 399 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 TPD52P55327 224 aaPredicted RBP15.15■□□□□ 0.02
HMGN4-201ENST00000377575 CLDN15P56746 228 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 PHC1P78364 1004 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 SGCBQ16585 318 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 ARHGAP11BQ3KRB8 267 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 SAXO2Q658L1 398 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 ZZZ3Q8IYH5 903 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 TMCO5AQ8N6Q1 288 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 GOLGA6L1Q8N7Z2 621 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 ARL8AQ96BM9 186 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 NEURL3Q96EH8 262 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 MAELQ96JY0 434 aaKnown RBP15.15■□□□□ 0.02
HMGN4-201ENST00000377575 ATP6V1G3Q96LB4 118 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 TEX37Q96LM6 180 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 RNF145Q96MT1 663 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 SLC35A5Q9BS91 424 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 RBM24Q9BX46 236 aaKnown RBP15.15■□□□□ 0.02
HMGN4-201ENST00000377575 PAQR5Q9NXK6 330 aaPredicted RBP15.15■□□□□ 0.02
HMGN4-201ENST00000377575 GPR45Q9Y5Y3 372 aa15.15■□□□□ 0.02
HMGN4-201ENST00000377575 EIF1AYO14602 144 aaKnown RBP15.14■□□□□ 0.01
HMGN4-201ENST00000377575 UBL4AP11441 157 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 ELK4P28324 431 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 KRTAP10-9P60411 292 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 RAC1P63000 192 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 TXNL4AP83876 142 aaKnown RBP15.14■□□□□ 0.01
HMGN4-201ENST00000377575 HPCAP84074 193 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 FGFBP1Q14512 234 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 PON3Q15166 354 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 GPR68Q15743 365 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 GSTA3Q16772 222 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 PDCD4Q53EL6 469 aaKnown RBP15.14■□□□□ 0.01
HMGN4-201ENST00000377575 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.14■□□□□ 0.01
HMGN4-201ENST00000377575 TNFAIP8L2Q6P589 184 aaPredicted RBP15.14■□□□□ 0.01
HMGN4-201ENST00000377575 LUZP2Q86TE4 346 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 CDH24Q86UP0 819 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 GGNQ86UU5 652 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 CNEP1R1Q8N9A8 125 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 FAM222BQ8WU58 562 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 OIT3Q8WWZ8 545 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 FIG4Q92562 907 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 ZNF75CPQ92670 426 aaPredicted RBP15.14■□□□□ 0.01
HMGN4-201ENST00000377575 OR52E6Q96RD3 313 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 PANX1Q96RD7 426 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 ZNF350Q9GZX5 532 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 CRIM1Q9NZV1 1036 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 CARD8Q9Y2G2 431 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 POLQO75417 2590 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 HEATR5AQ86XA9 2040 aa15.14■□□□□ 0.01
HMGN4-201ENST00000377575 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 TUBAL3A6NHL2 446 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 ZNF264O43296 627 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 EIF4E2O60573 245 aaKnown RBP15.13■□□□□ 0.01
HMGN4-201ENST00000377575 TNFSF13O75888 250 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 GUSBP08236 651 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 LINGO3P0C6S8 592 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 OR12D1P0DN82 309 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 ADH6P28332 368 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 EIF1AXP47813 144 aaKnown RBP15.13■□□□□ 0.01
HMGN4-201ENST00000377575 ANXA11P50995 505 aaKnown RBP15.13■□□□□ 0.01
HMGN4-201ENST00000377575 FOXF1Q12946 379 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 SNTB1Q13884 538 aaKnown RBP15.13■□□□□ 0.01
HMGN4-201ENST00000377575 SLC9B1Q4ZJI4 515 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 PDSS1Q5T2R2 415 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 PDZK1Q5T2W1 519 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 HEPHL1Q6MZM0 1159 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 PPP4R4Q6NUP7 873 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 CBLN3Q6UW01 205 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 ESPNLQ6ZVH7 1005 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 HDXQ7Z353 690 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 LURAP1LQ8IV03 231 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 TOR1AIP2Q8NFQ8 470 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 FNDC9Q8TBE3 224 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 LRRC8CQ8TDW0 803 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 XAGE5Q8WWM1 108 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 ZNF845Q96IR2 970 aaPredicted RBP15.13■□□□□ 0.01
HMGN4-201ENST00000377575 C7orf26Q96N11 449 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 RNF122Q9H9V4 155 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 POLE3Q9NRF9 147 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 GALNT8Q9NY28 637 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 MCTS1Q9ULC4 181 aaKnown RBP15.13■□□□□ 0.01
HMGN4-201ENST00000377575 ICAM5Q9UMF0 924 aa15.13■□□□□ 0.01
HMGN4-201ENST00000377575 GPC6Q9Y625 555 aaPredicted RBP15.13■□□□□ 0.01
HMGN4-201ENST00000377575 SERINC4A6NH21 518 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms