RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 NPIPA7E9PJI5 369 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 LSM1O15116 133 aaKnown RBP13.31□□□□□ -0.28
CLCN6-204ENST00000376491 GCM2O75603 506 aaPredicted RBP13.31□□□□□ -0.28
CLCN6-204ENST00000376491 TUBBP07437 444 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 NPIPA8P0DM63 369 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 HPGDP15428 266 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 LCN1P31025 176 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 SFTPDP35247 375 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 ATP5J2P56134 94 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 CARD18P57730 90 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 KRTAP1-1Q07627 177 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 ZNF239Q16600 458 aaKnown RBP13.31□□□□□ -0.28
CLCN6-204ENST00000376491 PDSS1Q5T2R2 415 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 KANK2Q63ZY3 851 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 ZCCHC12Q6PEW1 402 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 CBLN3Q6UW01 205 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 TFAP2EQ6VUC0 442 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 NUFIP2Q7Z417 695 aaKnown RBP13.31□□□□□ -0.28
CLCN6-204ENST00000376491 STK32CQ86UX6 486 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 MISPQ8IVT2 679 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 LILRA2Q8N149 483 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 GABRG1Q8N1C3 465 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 RNF128Q8TEB7 428 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 AKAP1Q92667 903 aaKnown RBP eCLIP13.31□□□□□ -0.28
CLCN6-204ENST00000376491 CDS1Q92903 461 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 S100PBPQ96BU1 408 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 ZNF524Q96C55 264 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 IQCGQ9H095 443 aaKnown RBP13.31□□□□□ -0.28
CLCN6-204ENST00000376491 CXorf56Q9H5V9 222 aa13.31□□□□□ -0.28
CLCN6-204ENST00000376491 SONP18583 2426 aaKnown RBP13.3□□□□□ -0.28
CLCN6-204ENST00000376491 SCDO00767 359 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 TMCC2O75069 709 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 SOX30O94993 753 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 HMGN2P05204 90 aaKnown RBP13.3□□□□□ -0.28
CLCN6-204ENST00000376491 NEFHP12036 1026 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 BCKDHAP12694 445 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 ME2P23368 584 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 SERPINB4P48594 390 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 RNF144AP50876 292 aaPredicted RBP13.3□□□□□ -0.28
CLCN6-204ENST00000376491 POU6F2P78424 691 aaPredicted RBP13.3□□□□□ -0.28
CLCN6-204ENST00000376491 ZNF117Q03924 483 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 TNK1Q13470 666 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 LASP1Q14847 261 aaKnown RBP13.3□□□□□ -0.28
CLCN6-204ENST00000376491 PCLAFQ15004 111 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 TOMM34Q15785 309 aaPredicted RBP13.3□□□□□ -0.28
CLCN6-204ENST00000376491 UGT3A2Q3SY77 523 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 GALNTL6Q49A17 601 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 GTF2IRD2BQ6EKJ0 949 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 ALKBH2Q6NS38 261 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 GTF2IRD2Q86UP8 949 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 TUSC5Q8IXB3 177 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 CNPY4Q8N129 248 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 PHOSPHO1Q8TCT1 267 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 JADE3Q92613 823 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 STACQ99469 402 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 BTBD2Q9BX70 525 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 COQ10BQ9H8M1 238 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 FANCFQ9NPI8 374 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 ZCCHC3Q9NUD5 404 aaKnown RBP13.3□□□□□ -0.28
CLCN6-204ENST00000376491 GIN1Q9NXP7 522 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 GIMAP2Q9UG22 337 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 ATP6V1HQ9UI12 483 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 ICAM5Q9UMF0 924 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 LAMP3Q9UQV4 416 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 KCNE3Q9Y6H6 103 aa13.3□□□□□ -0.28
CLCN6-204ENST00000376491 SMIM23A6NLE4 172 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 TMEM233B4DJY2 109 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 COPEO14579 308 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 ZNF195O14628 629 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 CHRNGP07510 517 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 KRT4P19013 534 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 ELK4P28324 431 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 EIF1P41567 113 aaKnown RBP13.29□□□□□ -0.28
CLCN6-204ENST00000376491 PPP2R2BQ00005 443 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 MLC1Q15049 377 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 TAB1Q15750 504 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 NDUFAF6Q330K2 333 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 TMEM201Q5SNT2 666 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLCN6-204ENST00000376491 ADAM5Q6NVV9 412 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 LRIG3Q6UXM1 1119 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 ATG4DQ86TL0 474 aaPredicted RBP13.29□□□□□ -0.28
CLCN6-204ENST00000376491 TDRPQ86YL5 185 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 C4orf33Q8N1A6 199 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 LRRN4CLQ8ND94 238 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 STEAP2Q8NFT2 490 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 OR7A2PQ8NGA2 310 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 FBXO27Q8NI29 283 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 EPS8L3Q8TE67 593 aaKnown RBP13.29□□□□□ -0.28
CLCN6-204ENST00000376491 NEUROG1Q92886 237 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 MTERF3Q96E29 417 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 PIGUQ9H490 435 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 DUSP22Q9NRW4 184 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 TMED5Q9Y3A6 229 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 ALPK2Q86TB3 2170 aa13.29□□□□□ -0.28
CLCN6-204ENST00000376491 OVOL3O00110 214 aa13.28□□□□□ -0.28
CLCN6-204ENST00000376491 SCAMP2O15127 329 aaKnown RBP13.28□□□□□ -0.28
CLCN6-204ENST00000376491 TRIM13O60858 407 aa13.28□□□□□ -0.28
CLCN6-204ENST00000376491 HSPA4LO95757 839 aa13.28□□□□□ -0.28
CLCN6-204ENST00000376491 SOD3P08294 240 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms