RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 RPS10-NUDT3A0A1W2PQS6 291 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 NPC1O15118 1278 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 RPS10P46783 165 aaKnown RBP13.38□□□□□ -0.27
LMX1B-202ENST00000373474 TAGLNQ01995 201 aaKnown RBP13.38□□□□□ -0.27
LMX1B-202ENST00000373474 NIPAL3Q6P499 406 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 TCEAL8Q8IYN2 117 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 CPXM2Q8N436 756 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 OR9A2Q8NGT5 310 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 PDE7BQ9NP56 450 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 C20orf202A1L168 122 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 SMAD6O43541 496 aaKnown RBP13.38□□□□□ -0.27
LMX1B-202ENST00000373474 GJB3O75712 270 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 RAB6AP20340 208 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 DLX5P56178 289 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 RRAS2P62070 204 aaPredicted RBP13.38□□□□□ -0.27
LMX1B-202ENST00000373474 RPP30P78346 268 aaKnown RBP13.38□□□□□ -0.27
LMX1B-202ENST00000373474 PTPRRQ15256 657 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 AVPI1Q5T686 147 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 C1orf94Q6P1W5 598 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 MFSD6LQ8IWD5 586 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 SFXN5Q8TD22 340 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 HAS2Q92819 552 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 GGHQ92820 318 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 CASD1Q96PB1 797 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 THSD1Q9NS62 852 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 IL20RAQ9UHF4 553 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 ADAM18Q9Y3Q7 739 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 LSM5Q9Y4Y9 91 aaKnown RBP13.38□□□□□ -0.27
LMX1B-202ENST00000373474 NPIPA2E9PIF3 369 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 NPIPA3F8WFD2 350 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 CCR7P32248 378 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 TBCEQ15813 527 aaPredicted RBP13.38□□□□□ -0.27
LMX1B-202ENST00000373474 DUSP7Q16829 419 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 SGPP2Q8IWX5 399 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 NT5C3BQ969T7 300 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 GPR34Q9UPC5 381 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 AKR1C2P52895 323 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 MEF2DQ14814 521 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 LRFN4Q6PJG9 635 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 CPOQ8IVL8 374 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 SKA3Q8IX90 412 aa13.38□□□□□ -0.27
LMX1B-202ENST00000373474 A0A0D9SG52 128 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 WDR5P61964 334 aaKnown RBP13.37□□□□□ -0.27
LMX1B-202ENST00000373474 PLP2Q04941 152 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 MRPL49Q13405 166 aaKnown RBP13.37□□□□□ -0.27
LMX1B-202ENST00000373474 FAM205BPQ63HN1 556 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 RFPL4BQ6ZWI9 263 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 CREB3L4Q8TEY5 395 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 LUZP4Q9P127 313 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 SLC6A5Q9Y345 797 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 OTOL1A6NHN0 477 aaPredicted RBP13.37□□□□□ -0.27
LMX1B-202ENST00000373474 NUPL2O15504 423 aaKnown RBP13.37□□□□□ -0.27
LMX1B-202ENST00000373474 SEC14L2O76054 403 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 MC3RP41968 323 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 AARDQ4LEZ3 155 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 FCRLBQ6BAA4 426 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.37□□□□□ -0.27
LMX1B-202ENST00000373474 ZFP82Q8N141 532 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 CPPED1Q9BRF8 314 aaPredicted RBP13.37□□□□□ -0.27
LMX1B-202ENST00000373474 DNMT3AQ9Y6K1 912 aaPredicted RBP13.37□□□□□ -0.27
LMX1B-202ENST00000373474 TP53I11O14683 189 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 BRINP1O60477 761 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 AOAHP28039 575 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 PRKAR1BP31321 381 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 THBS2P35442 1172 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 PBX2P40425 430 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 ARRB1P49407 418 aaPredicted RBP13.37□□□□□ -0.27
LMX1B-202ENST00000373474 PRPS1P60891 318 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 TRA2BP62995 288 aaKnown RBP13.37□□□□□ -0.27
LMX1B-202ENST00000373474 SGCAQ16586 387 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 INAVAQ3KP66 663 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 GGTA1PQ4G0N0 100 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 FAM199XQ6PEV8 388 aaPredicted RBP13.37□□□□□ -0.27
LMX1B-202ENST00000373474 PAQR9Q6ZVX9 377 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 PARP16Q8N5Y8 322 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 SORBS1Q9BX66 1292 aaKnown RBP13.37□□□□□ -0.27
LMX1B-202ENST00000373474 CCDC85CA6NKD9 419 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 CLEC3AO75596 197 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 DCNP07585 359 aaKnown RBP13.37□□□□□ -0.27
LMX1B-202ENST00000373474 ZNF888P0CJ79 500 aaPredicted RBP13.37□□□□□ -0.27
LMX1B-202ENST00000373474 CTSAP10619 480 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 SLC5A2P31639 672 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 RAP2BP61225 183 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 MLC1Q15049 377 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 C2orf76Q3KRA6 126 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 CARD17Q5XLA6 110 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 MAMDC2Q7Z304 686 aaPredicted RBP13.37□□□□□ -0.27
LMX1B-202ENST00000373474 OR5H6Q8NGV6 325 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 PAQR8Q8TEZ7 354 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 BMFQ96LC9 184 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 THAP7Q9BT49 309 aaPredicted RBP13.37□□□□□ -0.27
LMX1B-202ENST00000373474 SLAMF8Q9P0V8 285 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 CACNA1SQ13698 1873 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 KIF13AQ9H1H9 1805 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 NDUFB2O95178 105 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 PPP3CBP16298 524 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 GABRB3P28472 473 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 TAP2Q03519 686 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 KCNJ8Q15842 424 aa13.37□□□□□ -0.27
LMX1B-202ENST00000373474 TMEM163Q8TC26 289 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms