RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 SERINC4A6NH21 518 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 HCRTR2O43614 444 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 TOXO94900 526 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 H6PDO95479 791 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 CHRM4P08173 479 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 ETFAP13804 333 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 GCKP35557 465 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 MAGEA8P43361 318 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 ARFIP2P53365 341 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 CLDN15P56746 228 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 CHRNEQ04844 493 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 PLPPR5Q32ZL2 321 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 ADGRE4PQ86SQ3 457 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 CCDC71Q8IV32 467 aaPredicted RBP20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 ZNF619Q8N2I2 560 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 ZPLD1Q8TCW7 415 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 ZNF524Q96C55 264 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 TRNT1Q96Q11 434 aaKnown RBP20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 TUBA1CQ9BQE3 449 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 MED17Q9NVC6 651 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 Q9UFV3 132 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 LIPT1Q9Y234 373 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 L3MBTL1Q9Y468 752 aa20.28■□□□□ 0.84
ECHDC1-203ENST00000368291 SETXQ7Z333 2677 aaKnown RBP20.27■□□□□ 0.84
ECHDC1-203ENST00000368291 TRBV5-3A0A0A0MS03 114 aa20.27■□□□□ 0.84
ECHDC1-203ENST00000368291 H3BNH8 94 aa20.27■□□□□ 0.84
ECHDC1-203ENST00000368291 CLIC1O00299 241 aa20.27■□□□□ 0.84
ECHDC1-203ENST00000368291 CLDN14O95500 239 aa20.27■□□□□ 0.84
ECHDC1-203ENST00000368291 PSMA4P25789 261 aaKnown RBP20.27■□□□□ 0.84
ECHDC1-203ENST00000368291 ANXA11P50995 505 aaKnown RBP20.27■□□□□ 0.84
ECHDC1-203ENST00000368291 P2RX1P51575 399 aa20.27■□□□□ 0.84
ECHDC1-203ENST00000368291 SRYQ05066 204 aa20.27■□□□□ 0.84
ECHDC1-203ENST00000368291 NSUN5P2Q63ZY6 315 aa20.27■□□□□ 0.84
ECHDC1-203ENST00000368291 POC1BQ8TC44 478 aa20.27■□□□□ 0.84
ECHDC1-203ENST00000368291 PIGQQ9BRB3 760 aa20.27■□□□□ 0.84
ECHDC1-203ENST00000368291 QRSL1Q9H0R6 528 aaKnown RBP20.27■□□□□ 0.84
ECHDC1-203ENST00000368291 VAPAQ9P0L0 249 aa20.27■□□□□ 0.84
ECHDC1-203ENST00000368291 NBPF19A0A087WUL8 3843 aa20.26■□□□□ 0.83
ECHDC1-203ENST00000368291 A0A087WZY1 265 aa20.26■□□□□ 0.83
ECHDC1-203ENST00000368291 C7orf72A4D263 438 aa20.26■□□□□ 0.83
ECHDC1-203ENST00000368291 BCAS1O75363 584 aaPredicted RBP20.26■□□□□ 0.83
ECHDC1-203ENST00000368291 LINGO3P0C6S8 592 aa20.26■□□□□ 0.83
ECHDC1-203ENST00000368291 GRNP28799 593 aaKnown RBP20.26■□□□□ 0.83
ECHDC1-203ENST00000368291 CRATP43155 626 aa20.26■□□□□ 0.83
ECHDC1-203ENST00000368291 PLAURQ03405 335 aa20.26■□□□□ 0.83
ECHDC1-203ENST00000368291 FGFBP1Q14512 234 aa20.26■□□□□ 0.83
ECHDC1-203ENST00000368291 RGNQ15493 299 aa20.26■□□□□ 0.83
ECHDC1-203ENST00000368291 BCL2A1Q16548 175 aa20.26■□□□□ 0.83
ECHDC1-203ENST00000368291 RIPPLY2Q5TAB7 128 aa20.26■□□□□ 0.83
ECHDC1-203ENST00000368291 LRRC74BQ6ZQY2 392 aa20.26■□□□□ 0.83
ECHDC1-203ENST00000368291 HMGN2P46Q86SG4 172 aa20.26■□□□□ 0.83
ECHDC1-203ENST00000368291 COQ3Q9NZJ6 369 aa20.26■□□□□ 0.83
ECHDC1-203ENST00000368291 KLF2Q9Y5W3 355 aaPredicted RBP20.26■□□□□ 0.83
ECHDC1-203ENST00000368291 GMEB1Q9Y692 573 aa20.26■□□□□ 0.83
ECHDC1-203ENST00000368291 CD8B2A6NJW9 211 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 H0YC42 278 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 LINC01387J3KSC0 135 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 GTPBP1O00178 669 aaKnown RBP20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 ZNF264O43296 627 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 UBL4AP11441 157 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 PEPDP12955 493 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 CHRNB4P30926 498 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 CEACAM8P31997 349 aaPredicted RBP20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 SUCLG1P53597 346 aaKnown RBP20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 TPD52P55327 224 aaPredicted RBP20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 DSTNP60981 165 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 SKP2Q13309 424 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 TOMM34Q15785 309 aaPredicted RBP20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 PLXDC2Q6UX71 529 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 DLEU7Q6UYE1 221 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 RETREG3Q86VR2 466 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 LACC1Q8IV20 430 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 C10orf111Q8N326 155 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 GTPBP8Q8N3Z3 284 aaPredicted RBP20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 NAXEQ8NCW5 288 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 FAM71CQ8NEG0 241 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 TNIP2Q8NFZ5 429 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 OR10Q1Q8NGQ4 319 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 GPR119Q8TDV5 335 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 C10orf82Q8WW14 230 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 OIT3Q8WWZ8 545 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 TRIB1Q96RU8 372 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 KLHL14Q9P2G3 628 aa20.25■□□□□ 0.83
ECHDC1-203ENST00000368291 CLDN24A6NM45 220 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 H0Y3Z8 333 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 H3BML4 177 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 EIF4E2O60573 245 aaKnown RBP20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 DNAJA2O60884 412 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 NUDT7P0C024 238 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 TFPTP0C1Z6 253 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 NR2F1P10589 423 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 BMP2P12643 396 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 ZNF17P17021 662 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 RPS4Y1P22090 263 aaKnown RBP20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 PGM1P36871 562 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 ZNF41P51814 821 aaPredicted RBP20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 SUMO3P55854 103 aaPredicted RBP20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 LIX1LQ8IVB5 337 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 LILRB4Q8NHJ6 448 aa20.24■□□□□ 0.83
ECHDC1-203ENST00000368291 TSPEARQ8WU66 669 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms