RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 A0A0G2JK05 382 aa12.65□□□□□ -0.38
PRKN-205ENST00000366897 PAPLNO95428 1278 aa12.65□□□□□ -0.38
PRKN-205ENST00000366897 GKN3PP0CG01 181 aa12.65□□□□□ -0.38
PRKN-205ENST00000366897 PRG2P13727 222 aa12.65□□□□□ -0.38
PRKN-205ENST00000366897 POLR2CP19387 275 aaPredicted RBP12.65□□□□□ -0.38
PRKN-205ENST00000366897 M6PRP20645 277 aa12.65□□□□□ -0.38
PRKN-205ENST00000366897 PTGS2P35354 604 aa12.65□□□□□ -0.38
PRKN-205ENST00000366897 ZP1P60852 638 aa12.65□□□□□ -0.38
PRKN-205ENST00000366897 AANATQ16613 207 aa12.65□□□□□ -0.38
PRKN-205ENST00000366897 CCNJQ5T5M9 372 aa12.65□□□□□ -0.38
PRKN-205ENST00000366897 SFTPA1Q8IWL2 248 aa12.65□□□□□ -0.38
PRKN-205ENST00000366897 LINC00471Q8N535 108 aa12.65□□□□□ -0.38
PRKN-205ENST00000366897 OR2T33Q8NG76 320 aa12.65□□□□□ -0.38
PRKN-205ENST00000366897 WDR89Q96FK6 387 aaPredicted RBP12.65□□□□□ -0.38
PRKN-205ENST00000366897 SORCS2Q96PQ0 1159 aa12.65□□□□□ -0.38
PRKN-205ENST00000366897 LGR4Q9BXB1 951 aa12.65□□□□□ -0.38
PRKN-205ENST00000366897 METTL17Q9H7H0 456 aaPredicted RBP12.65□□□□□ -0.38
PRKN-205ENST00000366897 BCL2L10Q9HD36 194 aa12.65□□□□□ -0.38
PRKN-205ENST00000366897 EMC7Q9NPA0 242 aa12.65□□□□□ -0.38
PRKN-205ENST00000366897 C20orf141Q9NUB4 165 aa12.65□□□□□ -0.38
PRKN-205ENST00000366897 EXOGQ9Y2C4 368 aaKnown RBP12.65□□□□□ -0.38
PRKN-205ENST00000366897 MAN2B1O00754 1011 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 RGS11O94810 467 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 ADRB1P08588 477 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 NPR2P20594 1047 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 PTBP1P26599 531 aaKnown RBP eCLIP12.64□□□□□ -0.39
PRKN-205ENST00000366897 NTHL1P78549 312 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 MFSD13AQ14CX5 517 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 TCEAL5Q5H9L2 206 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 GPR139Q6DWJ6 353 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 PSRC1Q6PGN9 363 aaPredicted RBP12.64□□□□□ -0.39
PRKN-205ENST00000366897 DCUN1D3Q8IWE4 304 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 FTMTQ8N4E7 242 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 OR2L2Q8NH16 312 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 PFN4Q8NHR9 129 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 SLC41A3Q96GZ6 507 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 C4orf36Q96KX1 117 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 CLEC4MQ9H2X3 399 aaPredicted RBP12.64□□□□□ -0.39
PRKN-205ENST00000366897 SYNPO2LQ9H987 977 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 ASB4Q9Y574 426 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 ALPK2Q86TB3 2170 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 IGKV1-8A0A0C4DH67 115 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 A0A1W2PPV9 198 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 POM121CA8CG34 1229 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 ZNF593O00488 134 aaPredicted RBP12.64□□□□□ -0.39
PRKN-205ENST00000366897 PTHLHP12272 177 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 NDUFV2P19404 249 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 CERS1P27544 350 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 RBMS1P29558 406 aaKnown RBP12.64□□□□□ -0.39
PRKN-205ENST00000366897 PYCR1P32322 319 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 GSG1Q2KHT4 349 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 FAM109BQ6ICB4 259 aaPredicted RBP12.64□□□□□ -0.39
PRKN-205ENST00000366897 SLC16A11Q8NCK7 471 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 OR5J2Q8NH18 312 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 ABHD4Q8TB40 342 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 ACOT11Q8WXI4 607 aaPredicted RBP12.64□□□□□ -0.39
PRKN-205ENST00000366897 ACOT12Q8WYK0 555 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 RIT1Q92963 219 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 ARRDC3Q96B67 414 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 UBL7Q96S82 380 aaPredicted RBP12.64□□□□□ -0.39
PRKN-205ENST00000366897 DDOQ99489 341 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 TRAF4Q9BUZ4 470 aaPredicted RBP12.64□□□□□ -0.39
PRKN-205ENST00000366897 OR52D1Q9H346 318 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 DLL4Q9NR61 685 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 LRRK1Q38SD2 2015 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 CACNA1CQ13936 2221 aa12.64□□□□□ -0.39
PRKN-205ENST00000366897 A0A0A6YYD5 115 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 NPIPA5A0A0B4J1W7 369 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 A0A0G2JPF8 293 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 HNRNPCL2B2RXH8 293 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 HNRNPCL3B7ZW38 293 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 NPIPA7E9PJI5 369 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 NUPL2O15504 423 aaKnown RBP12.63□□□□□ -0.39
PRKN-205ENST00000366897 H2AFB2P0C5Z0 115 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 NPIPA8P0DM63 369 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 HNRNPCL4P0DMR1 293 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 ATF1P18846 271 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 CFL1P23528 166 aaKnown RBP12.63□□□□□ -0.39
PRKN-205ENST00000366897 FPR3P25089 353 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 RFX3P48380 749 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 FXYD6P3P58550 94 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 SNRPNP63162 240 aaKnown RBP12.63□□□□□ -0.39
PRKN-205ENST00000366897 CSNK1G2P78368 415 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 PUDPQ08623 228 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 SUZ12Q15022 739 aaKnown RBP12.63□□□□□ -0.39
PRKN-205ENST00000366897 TMEM255AQ5JRV8 349 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 CDC73Q6P1J9 531 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 NIPAL3Q6P499 406 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 THSD4Q6ZMP0 1018 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 SSX6Q7RTT6 188 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 AMZ2Q86W34 360 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 ARL14Q8N4G2 192 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 NUP43Q8NFH3 380 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 OR51L1Q8NGJ5 315 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 OR51Q1Q8NH59 317 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 BRD7Q9NPI1 651 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 KCMF1Q9P0J7 381 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 NFKBIL1Q9UBC1 381 aaPredicted RBP12.63□□□□□ -0.39
PRKN-205ENST00000366897 NUP50Q9UKX7 468 aa12.63□□□□□ -0.39
PRKN-205ENST00000366897 ZMIZ1Q9ULJ6 1067 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms