RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 MAGEA8P43361 318 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 HLCSP50747 726 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 LRRC37A5PQ49AS3 106 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 KLHL15Q96M94 604 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 BOKQ9UMX3 212 aaPredicted RBP17.41■□□□□ 0.38
CLIP2-202ENST00000361545 TMEM202A6NGA9 273 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 H0YIV9 168 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 SFTPBP07988 381 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 NUDT7P0C024 238 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 BMP2P12643 396 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 SLC2A5P22732 501 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 GCH1P30793 250 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 TMBIM6P55061 237 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 OR9K2Q8NGE7 335 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 FAM46BQ96A09 425 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 C16orf58Q96GQ5 468 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 KCNIP3Q9Y2W7 256 aa17.41■□□□□ 0.38
CLIP2-202ENST00000361545 FAM155AB1AL88 458 aaPredicted RBP17.4■□□□□ 0.38
CLIP2-202ENST00000361545 SLC33A1O00400 549 aaPredicted RBP17.4■□□□□ 0.38
CLIP2-202ENST00000361545 UCHL1P09936 223 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 PITPNBP48739 271 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 LTB4RQ15722 352 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 GRK1Q15835 563 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 RAB11BQ15907 218 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 SLC37A2Q8TED4 501 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 TUBA1CQ9BQE3 449 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 LMF2Q9BU23 707 aaKnown RBP17.4■□□□□ 0.38
CLIP2-202ENST00000361545 MOV10Q9HCE1 1003 aaKnown RBP17.4■□□□□ 0.38
CLIP2-202ENST00000361545 MRPL15Q9P015 296 aaKnown RBP17.4■□□□□ 0.38
CLIP2-202ENST00000361545 ST14Q9Y5Y6 855 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 HSPE1-MOB4S4R3N1 261 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 ICAM2P13598 275 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 MAGEA12P43365 314 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 MRPL58Q14197 206 aaKnown RBP17.4■□□□□ 0.38
CLIP2-202ENST00000361545 MFSD8Q8NHS3 518 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 GTF2H4Q92759 462 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 ZNF350Q9GZX5 532 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 DNTTIP1Q9H147 329 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 SEMA6CQ9H3T2 930 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 ACSS1Q9NUB1 689 aaPredicted RBP17.4■□□□□ 0.38
CLIP2-202ENST00000361545 OR1Q1Q15612 314 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 MARVELD2Q8N4S9 558 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 MINDY2Q8NBR6 621 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 ZNF420Q8TAQ5 688 aaPredicted RBP17.4■□□□□ 0.38
CLIP2-202ENST00000361545 ALG8Q9BVK2 526 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 TWSG1Q9GZX9 223 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 BPNT1O95861 308 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 HTR3AP46098 478 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 WBP2NLQ6ICG8 309 aa17.4■□□□□ 0.38
CLIP2-202ENST00000361545 TLCD2A6NGC4 264 aa17.39■□□□□ 0.38
CLIP2-202ENST00000361545 CLCA1A8K7I4 914 aa17.39■□□□□ 0.38
CLIP2-202ENST00000361545 HTR3BO95264 441 aa17.39■□□□□ 0.38
CLIP2-202ENST00000361545 WDPCPO95876 746 aa17.39■□□□□ 0.38
CLIP2-202ENST00000361545 S100A6P06703 90 aa17.39■□□□□ 0.38
CLIP2-202ENST00000361545 HOXB9P17482 250 aaPredicted RBP17.39■□□□□ 0.38
CLIP2-202ENST00000361545 TCN2P20062 427 aa17.39■□□□□ 0.38
CLIP2-202ENST00000361545 DCAF7P61962 342 aa17.39■□□□□ 0.38
CLIP2-202ENST00000361545 SBSNQ6UWP8 590 aa17.39■□□□□ 0.38
CLIP2-202ENST00000361545 AKAP1Q92667 903 aaKnown RBP eCLIP17.39■□□□□ 0.38
CLIP2-202ENST00000361545 QRSL1Q9H0R6 528 aaKnown RBP17.39■□□□□ 0.38
CLIP2-202ENST00000361545 ADAM29Q9UKF5 820 aa17.39■□□□□ 0.38
CLIP2-202ENST00000361545 LOC102723532A0A0G2JNH3 316 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 POM121BA6NF01 834 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 GSTT2P0CG29 244 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 SLC26A5P58743 744 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 POU3F1Q03052 451 aaPredicted RBP17.39■□□□□ 0.37
CLIP2-202ENST00000361545 GPR19Q15760 415 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 Q8N402 240 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 DUSP19Q8WTR2 217 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 BIRC8Q96P09 236 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 YKT6O15498 198 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 RAB15P59190 212 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 MRPL2Q5T653 305 aaKnown RBP17.39■□□□□ 0.37
CLIP2-202ENST00000361545 HES5Q5TA89 166 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 ZBTB8BQ8NAP8 495 aaPredicted RBP17.39■□□□□ 0.37
CLIP2-202ENST00000361545 RCBTB1Q8NDN9 531 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 ITFG2Q969R8 447 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 UTP23Q9BRU9 249 aaKnown RBP17.39■□□□□ 0.37
CLIP2-202ENST00000361545 ENKD1Q9H0I2 346 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 PCDH17O14917 1159 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 SLC16A7O60669 478 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 B3GALT4O96024 378 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 RAB3BP20337 219 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 PAPD4Q6PIY7 484 aaKnown RBP17.39■□□□□ 0.37
CLIP2-202ENST00000361545 ACOT11Q8WXI4 607 aaPredicted RBP17.39■□□□□ 0.37
CLIP2-202ENST00000361545 CHRDQ9H2X0 955 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 PADI1Q9ULC6 663 aa17.39■□□□□ 0.37
CLIP2-202ENST00000361545 TMEM265A0A087WTH1 108 aa17.38■□□□□ 0.37
CLIP2-202ENST00000361545 TGFBR3Q03167 851 aa17.38■□□□□ 0.37
CLIP2-202ENST00000361545 TMEM176BQ3YBM2 270 aaPredicted RBP17.38■□□□□ 0.37
CLIP2-202ENST00000361545 C14orf28Q4W4Y0 310 aa17.38■□□□□ 0.37
CLIP2-202ENST00000361545 HENMT1Q5T8I9 393 aaKnown RBP17.38■□□□□ 0.37
CLIP2-202ENST00000361545 PODNL1Q6PEZ8 512 aa17.38■□□□□ 0.37
CLIP2-202ENST00000361545 MMP21Q8N119 569 aa17.38■□□□□ 0.37
CLIP2-202ENST00000361545 HEMK1Q9Y5R4 338 aaPredicted RBP17.38■□□□□ 0.37
CLIP2-202ENST00000361545 LTBP4Q8N2S1 1624 aa17.38■□□□□ 0.37
CLIP2-202ENST00000361545 DCDC2BA2VCK2 349 aa17.38■□□□□ 0.37
CLIP2-202ENST00000361545 TSPAN4O14817 238 aa17.38■□□□□ 0.37
CLIP2-202ENST00000361545 GALR3O60755 368 aaPredicted RBP17.38■□□□□ 0.37
CLIP2-202ENST00000361545 UQCRC1P31930 480 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms