RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 SCDO00767 359 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 OR10H3O60404 316 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 ABCB7O75027 752 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 PRG2P13727 222 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 CSRP1P21291 193 aaKnown RBP19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 ABCD3P28288 659 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 RNF144AP50876 292 aaPredicted RBP19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 PNLIPRP2P54317 469 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 NRG3P56975 720 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 FOXK2Q01167 660 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 FOXD4Q12950 439 aaPredicted RBP19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 KEAP1Q14145 624 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 FAM69BQ5VUD6 431 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 PRR22Q8IZ63 422 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 ZNF786Q8N393 782 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 PARP8Q8N3A8 854 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 CT55Q8WUE5 264 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 ADOQ96SZ5 270 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 NIPSNAP1Q9BPW8 284 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 FOXJ2Q9P0K8 574 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 ENOPH1Q9UHY7 261 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 NTNG1Q9Y2I2 539 aa19.3■□□□□ 0.68
MAP1LC3A-201ENST00000360668 IGHV1-45A0A0A0MS14 117 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 SPAARA0A1B0GVQ0 90 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 A0A1W2PQ72 361 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 TRAPPC13A5PLN9 417 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 ZFAND5O76080 213 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 CLIC3O95833 236 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 GASTP01350 101 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 NGFRP08138 427 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 LINGO3P0C6S8 592 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 CYP4B1P13584 511 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 HPGDP15428 266 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 MMP11P24347 488 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 HTR2AP28223 471 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 NPRL3Q12980 569 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 TOP3AQ13472 1001 aaPredicted RBP19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 OR1Q1Q15612 314 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 RBM48Q5RL73 367 aaKnown RBP19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 FNDC7Q5VTL7 733 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 GDF7Q7Z4P5 450 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 ZNF440Q8IYI8 595 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 ESX1Q8N693 406 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 SETD9Q8NE22 299 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 DGCR6LQ9BY27 220 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 FLRT3Q9NZU0 649 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 HS3ST3B1Q9Y662 390 aa19.29■□□□□ 0.68
MAP1LC3A-201ENST00000360668 E9PQ18 207 aa19.28■□□□□ 0.68
MAP1LC3A-201ENST00000360668 CSTAP01040 98 aa19.28■□□□□ 0.68
MAP1LC3A-201ENST00000360668 THY1P04216 161 aa19.28■□□□□ 0.68
MAP1LC3A-201ENST00000360668 COX6A1P12074 109 aa19.28■□□□□ 0.68
MAP1LC3A-201ENST00000360668 TCN2P20062 427 aa19.28■□□□□ 0.68
MAP1LC3A-201ENST00000360668 POLR2IP36954 125 aaKnown RBP19.28■□□□□ 0.68
MAP1LC3A-201ENST00000360668 EXT1Q16394 746 aa19.28■□□□□ 0.68
MAP1LC3A-201ENST00000360668 ZNF691Q5VV52 312 aa19.28■□□□□ 0.68
MAP1LC3A-201ENST00000360668 PGBD2Q6P3X8 592 aa19.28■□□□□ 0.68
MAP1LC3A-201ENST00000360668 ZNF613Q6PF04 617 aa19.28■□□□□ 0.68
MAP1LC3A-201ENST00000360668 FAM71CQ8NEG0 241 aa19.28■□□□□ 0.68
MAP1LC3A-201ENST00000360668 OR4K5Q8NGD3 323 aa19.28■□□□□ 0.68
MAP1LC3A-201ENST00000360668 HDAC2Q92769 488 aaKnown RBP19.28■□□□□ 0.68
MAP1LC3A-201ENST00000360668 TMEM27Q9HBJ8 222 aa19.28■□□□□ 0.68
MAP1LC3A-201ENST00000360668 TCFL5Q9UL49 500 aa19.28■□□□□ 0.68
MAP1LC3A-201ENST00000360668 A0A087WUU8 490 aa19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 OR6C70A6NIJ9 312 aa19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 BCKDKO14874 412 aa19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 ICOSLGO75144 302 aa19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 IFNGR2P38484 337 aa19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 ACAA2P42765 397 aaKnown RBP19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 UGT2B15P54855 530 aa19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 TARDBPQ13148 414 aaKnown RBP eCLIP19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 TMPRSS12Q86WS5 348 aa19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 AMER2Q8N7J2 671 aa19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 ELP5Q8TE02 316 aa19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 FBLIM1Q8WUP2 373 aa19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 ACOT11Q8WXI4 607 aaPredicted RBP19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 GTPBP3Q969Y2 492 aaKnown RBP19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 IMMP1LQ96LU5 166 aa19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 TRIM2Q9C040 744 aa19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 FAM117AQ9C073 453 aa19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 ING2Q9H160 280 aa19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 FARSAQ9Y285 508 aaKnown RBP19.27■□□□□ 0.68
MAP1LC3A-201ENST00000360668 A0A1W2PQD3 144 aa19.27■□□□□ 0.67
MAP1LC3A-201ENST00000360668 MED19A0JLT2 244 aaPredicted RBP19.27■□□□□ 0.67
MAP1LC3A-201ENST00000360668 TMEM200CA6NKL6 621 aa19.27■□□□□ 0.67
MAP1LC3A-201ENST00000360668 TNFSF15O95150 251 aa19.27■□□□□ 0.67
MAP1LC3A-201ENST00000360668 CLK3P49761 638 aaKnown RBP19.27■□□□□ 0.67
MAP1LC3A-201ENST00000360668 ISL1P61371 349 aa19.27■□□□□ 0.67
MAP1LC3A-201ENST00000360668 EFR3AQ14156 821 aa19.27■□□□□ 0.67
MAP1LC3A-201ENST00000360668 LSMEM1Q8N8F7 131 aa19.27■□□□□ 0.67
MAP1LC3A-201ENST00000360668 M1APQ8TC57 530 aa19.27■□□□□ 0.67
MAP1LC3A-201ENST00000360668 PITX2Q99697 317 aa19.27■□□□□ 0.67
MAP1LC3A-201ENST00000360668 UCK2Q9BZX2 261 aa19.27■□□□□ 0.67
MAP1LC3A-201ENST00000360668 LIN28AQ9H9Z2 209 aaKnown RBP19.27■□□□□ 0.67
MAP1LC3A-201ENST00000360668 EXOSC3Q9NQT5 275 aaKnown RBP19.27■□□□□ 0.67
MAP1LC3A-201ENST00000360668 NDRG4Q9ULP0 352 aaKnown RBP19.27■□□□□ 0.67
MAP1LC3A-201ENST00000360668 SLC7A7Q9UM01 511 aa19.27■□□□□ 0.67
MAP1LC3A-201ENST00000360668 NPFFR2Q9Y5X5 522 aa19.27■□□□□ 0.67
MAP1LC3A-201ENST00000360668 SDK2Q58EX2 2172 aa19.26■□□□□ 0.67
MAP1LC3A-201ENST00000360668 SOCS6O14544 535 aa19.26■□□□□ 0.67
MAP1LC3A-201ENST00000360668 PPM1BO75688 479 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms