RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 GPR52Q9Y2T5 361 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 GON4LQ3T8J9 2241 aa16.92■□□□□ 0.3
PDLIM7-203ENST00000359895 CUL9Q8IWT3 2517 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 KNL1Q8NG31 2342 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 SPTBP11277 2137 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 IGHV1OR21-1A0A087WYE8 117 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 A0A0B4J2E0 115 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 A0A1B0GX12 115 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 CDC42EP2O14613 210 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 DUX1O43812 170 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 IGKV1D-16P01601 117 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 IFNA16P05015 189 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 BMP7P18075 431 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 MAOAP21397 527 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 PSMA1P25786 263 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 GCGRP47871 477 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 ATP12AP54707 1039 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 CDH11P55287 796 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 HSD11B2P80365 405 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 INAQ16352 499 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 AADACL4Q5VUY2 407 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 NKAIN2Q5VXU1 208 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 NXNL2Q5VZ03 156 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 TUBA3EQ6PEY2 450 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 ZC3H14Q6PJT7 736 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 NPSR1Q6W5P4 371 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 WDR88Q6ZMY6 472 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 C11orf74Q86VG3 221 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 MFSD4AQ8N468 514 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 ZNF614Q8N883 585 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 RCBTB1Q8NDN9 531 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 RNF217Q8TC41 542 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 OIT3Q8WWZ8 545 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 DPH1Q9BZG8 443 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 OR52D1Q9H346 318 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 UBQLN3Q9H347 655 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 FN3KQ9H479 309 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 SIAEQ9HAT2 523 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 NDUFB11Q9NX14 153 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 DNAJB12Q9NXW2 375 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 H2AFY2Q9P0M6 372 aaPredicted RBP16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 CBLCQ9ULV8 474 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 STUB1Q9UNE7 303 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 ERVK-19Q9WJR5 959 aa16.91■□□□□ 0.3
PDLIM7-203ENST00000359895 NPIPB9F8W1W9 429 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 HRKO00198 91 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 OR2B3O76000 313 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 HBQ1P09105 142 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 BMP4P12644 408 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 ETV5P41161 510 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 ETV1P50549 477 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 WNT4P56705 351 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 PLAURQ03405 335 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 RGS21Q2M5E4 152 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 BMP8AQ7Z5Y6 402 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 GID4Q8IVV7 300 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 SLC43A2Q8N370 569 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 LSMEM1Q8N8F7 131 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 OR4N2Q8NGD1 307 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 PFN4Q8NHR9 129 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 C16orf52Q8NHV5 167 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 BPIFA2Q96DR5 249 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 OR1F2PQ96R84 312 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 TBCCD1Q9NVR7 557 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 KLHL3Q9UH77 587 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 MUC3AQ02505 3323 aa16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 COL5A1P20908 1838 aaPredicted RBP16.9■□□□□ 0.3
PDLIM7-203ENST00000359895 TMEM150CB9EJG8 249 aa16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 CH25HO95992 272 aa16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 GLB1P16278 677 aa16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 CPEP16870 476 aa16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 MAKP20794 623 aa16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 HTR1FP30939 366 aa16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 ACAA2P42765 397 aaKnown RBP16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 PGDP52209 483 aa16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 OR1D5P58170 312 aa16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 GPLD1P80108 840 aa16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 SRSF5Q13243 272 aaKnown RBP16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 ITGADQ13349 1161 aa16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 CACTIN-AS1Q8N1I8 211 aa16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 METTL27Q8N6F8 245 aaPredicted RBP16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 ZNF615Q8N8J6 731 aa16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 CHPT1Q8WUD6 406 aa16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 NECAB3Q96P71 396 aaPredicted RBP16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 IER2Q9BTL4 223 aa16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 SEMA5BQ9P283 1151 aa16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 BAIAP2Q9UQB8 552 aa16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 EXOGQ9Y2C4 368 aaKnown RBP16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 DTX4Q9Y2E6 619 aa16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 OR10H1Q9Y4A9 318 aa16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 TMEM184BQ9Y519 407 aaPredicted RBP16.89■□□□□ 0.3
PDLIM7-203ENST00000359895 A0A1B0GWA3 101 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 K7ESF4 209 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 TAF4O00268 1085 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 DSCR3O14972 297 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 DYRK3O43781 588 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 HCN1O60741 890 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 GPX5O75715 221 aa16.89■□□□□ 0.29
PDLIM7-203ENST00000359895 CT45A8P0DMV1 189 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms