RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 ARL4DP49703 201 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 NUDT6P53370 316 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 OR2B6P58173 313 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 ZNF155Q12901 538 aaPredicted RBP11.73□□□□□ -0.53
GGPS1-202ENST00000358966 CDK5R2Q13319 367 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 KIF26BQ2KJY2 2108 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 TYW3Q6IPR3 259 aaKnown RBP11.73□□□□□ -0.53
GGPS1-202ENST00000358966 B3GNT8Q7Z7M8 397 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 VWA5B2Q8N398 1253 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 ZNF614Q8N883 585 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 ZNF321PQ8N8H1 164 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 RDH12Q96NR8 316 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 LMF1Q96S06 567 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 MAN2C1Q9NTJ4 1040 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 C19orf53Q9UNZ5 99 aaPredicted RBP11.73□□□□□ -0.53
GGPS1-202ENST00000358966 MRPS7Q9Y2R9 242 aaKnown RBP11.73□□□□□ -0.53
GGPS1-202ENST00000358966 ZNF175Q9Y473 711 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 WDR45Q9Y484 360 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 PCDHGA6Q9Y5G7 932 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 EP300Q09472 2414 aaPredicted RBP11.73□□□□□ -0.53
GGPS1-202ENST00000358966 SLC1A7O00341 560 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 SLC16A6O15403 523 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 SIGLEC6O43699 453 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 ALPPP05187 535 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 ITGAMP11215 1152 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 RNH1P13489 461 aaKnown RBP11.73□□□□□ -0.53
GGPS1-202ENST00000358966 PRG2P13727 222 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 ELOAQ14241 798 aaKnown RBP11.73□□□□□ -0.53
GGPS1-202ENST00000358966 ZNF267Q14586 743 aaPredicted RBP11.73□□□□□ -0.53
GGPS1-202ENST00000358966 MINDY4Q4G0A6 757 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 COLEC12Q5KU26 742 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 MANEAQ5SRI9 462 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 ZNF773Q6PK81 442 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 CDH24Q86UP0 819 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 SLC30A8Q8IWU4 369 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 COX18Q8N8Q8 333 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 OR52P1PQ8NH57 321 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 RHOXF1Q8NHV9 184 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 BBS10Q8TAM1 723 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 TSLPQ969D9 159 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 MARVELD3Q96A59 401 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 RNF170Q96K19 258 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 SDF2Q99470 211 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 GPA33Q99795 319 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 CCDC90BQ9GZT6 254 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 NECTIN3Q9NQS3 549 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 KCND3Q9UK17 655 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 PILRBQ9UKJ0 227 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 NDRG4Q9ULP0 352 aaKnown RBP11.73□□□□□ -0.53
GGPS1-202ENST00000358966 AP3D1O14617 1153 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 DUX1O43812 170 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 ZNF780AO75290 641 aaPredicted RBP11.73□□□□□ -0.53
GGPS1-202ENST00000358966 CCNB2O95067 398 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 ANGPTL1O95841 491 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 LGI1O95970 557 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 PTTG1O95997 202 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 JUNBP17275 347 aaPredicted RBP11.73□□□□□ -0.53
GGPS1-202ENST00000358966 EPHA8P29322 1005 aaPredicted RBP11.73□□□□□ -0.53
GGPS1-202ENST00000358966 VWA2Q5GFL6 755 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 ZNF574Q6ZN55 896 aaPredicted RBP11.73□□□□□ -0.53
GGPS1-202ENST00000358966 ADCK1Q86TW2 530 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 ENTHD1Q8IYW4 607 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 TMEM105Q8N8V8 129 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 MOAP1Q96BY2 351 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 OPALINQ96PE5 141 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 GAREM1Q9H706 876 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 UCK1Q9HA47 277 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 BCL2L10Q9HD36 194 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 C11orf16Q9NQ32 467 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 PRTFDC1Q9NRG1 225 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 CYB5R1Q9UHQ9 305 aa11.73□□□□□ -0.53
GGPS1-202ENST00000358966 LY6G6EA0A0G2JKS1 128 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 ZNF98A6NK75 572 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 H3BMH7 237 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 ABCB7O75027 752 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 UGT2B17O75795 530 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 IFNA16P05015 189 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 S100A6P06703 90 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 H1F0P07305 194 aaKnown RBP11.72□□□□□ -0.53
GGPS1-202ENST00000358966 MFSD13AQ14CX5 517 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 DCST2Q5T1A1 773 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 TCEAL6Q6IPX3 200 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 ZNF770Q6IQ21 691 aaPredicted RBP11.72□□□□□ -0.53
GGPS1-202ENST00000358966 PODNL1Q6PEZ8 512 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 TMEM65Q6PI78 240 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 LINC00299Q6ZSB3 139 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 GDPD3Q7L5L3 318 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 C1orf210Q8IVY1 113 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 FAM83FQ8NEG4 500 aaPredicted RBP11.72□□□□□ -0.53
GGPS1-202ENST00000358966 APH1BQ8WW43 257 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 RIT1Q92963 219 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 TCEAL3Q969E4 200 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 POP5Q969H6 163 aaKnown RBP11.72□□□□□ -0.53
GGPS1-202ENST00000358966 RBM18Q96H35 190 aaKnown RBP11.72□□□□□ -0.53
GGPS1-202ENST00000358966 TRNT1Q96Q11 434 aaKnown RBP11.72□□□□□ -0.53
GGPS1-202ENST00000358966 SEC22CQ9BRL7 303 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 CUTCQ9NTM9 273 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 PTGFRNQ9P2B2 879 aa11.72□□□□□ -0.53
GGPS1-202ENST00000358966 EIF3KQ9UBQ5 218 aaKnown RBP11.72□□□□□ -0.53
GGPS1-202ENST00000358966 ERVK-19Q9WJR5 959 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms